Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm42675-201ENSMUST00000197552 4035 ntBASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm22956-201ENSMUST00000122520 80 ntBASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm29104-201ENSMUST00000186304 222 ntBASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.72□□□□□ -1.65
Cpsf1Q9EPU4 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Gm18433-202ENSMUST00000195682 196 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Gm45269-201ENSMUST00000210359 282 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Gm35405-201ENSMUST00000218754 400 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Gm9370-201ENSMUST00000222787 609 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cpsf1Q9EPU4 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gm23957-201ENSMUST00000157209 90 ntBASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gm5917-201ENSMUST00000217638 721 ntBASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.7□□□□□ -1.66
Cpsf1Q9EPU4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm24119-201ENSMUST00000103979 246 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm26387-201ENSMUST00000104238 132 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm6797-201ENSMUST00000119440 512 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm24627-201ENSMUST00000122764 138 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm23824-201ENSMUST00000158741 276 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm26988-201ENSMUST00000183296 945 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm44343-201ENSMUST00000196702 90 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Gm8106-201ENSMUST00000213123 523 ntBASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 CT009504.1-201ENSMUST00000218252 3330 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Gm13064-201ENSMUST00000119125 557 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Gm26991-201ENSMUST00000180950 620 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Mir6413-201ENSMUST00000184049 108 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 AC153564.2-201ENSMUST00000219464 273 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Gm18388-201ENSMUST00000222339 557 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cpsf1Q9EPU4 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Gm12149-201ENSMUST00000117511 654 ntBASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Gm6893-201ENSMUST00000118385 522 ntBASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Gm11877-201ENSMUST00000118921 852 ntBASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Gm11708-201ENSMUST00000119530 832 ntBASIC4.67□□□□□ -1.66
Cpsf1Q9EPU4 Gm13532-201ENSMUST00000120373 240 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms