Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm25833-201ENSMUST00000104137 133 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm26273-201ENSMUST00000104180 131 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm14564-201ENSMUST00000122159 294 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm13852-201ENSMUST00000122350 242 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm2862-201ENSMUST00000161524 328 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm9613-201ENSMUST00000171662 196 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm27828-201ENSMUST00000184108 119 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm38330-201ENSMUST00000192743 959 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Trbv28-201ENSMUST00000192804 264 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm38332-201ENSMUST00000194189 147 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm7530-201ENSMUST00000218466 605 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm4263-202ENSMUST00000221392 667 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm23518-201ENSMUST00000082835 153 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm25481-201ENSMUST00000083221 158 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.57□□□□□ -1.84
Cdc40Q9DC48 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm25765-201ENSMUST00000104100 132 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm11566-201ENSMUST00000118550 203 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm13831-201ENSMUST00000118764 302 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm14282-201ENSMUST00000119484 240 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm12335-201ENSMUST00000119738 327 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm26148-201ENSMUST00000157430 68 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm25436-201ENSMUST00000158275 145 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm3851-201ENSMUST00000168653 318 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm23365-201ENSMUST00000175019 125 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm25960-201ENSMUST00000175110 125 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm44453-201ENSMUST00000175161 126 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm25195-201ENSMUST00000177656 126 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm25525-201ENSMUST00000177701 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm26178-201ENSMUST00000177706 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm26465-201ENSMUST00000178517 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm24317-201ENSMUST00000178536 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm25021-201ENSMUST00000179184 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm22995-201ENSMUST00000179670 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm24424-201ENSMUST00000179714 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm24389-201ENSMUST00000179962 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm25672-201ENSMUST00000180111 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm29163-201ENSMUST00000188029 107 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm28191-201ENSMUST00000189112 211 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm37239-201ENSMUST00000193510 141 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Mir7682-201ENSMUST00000198467 58 ntBASIC3.56□□□□□ -1.84
Cdc40Q9DC48 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms