Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22590-201ENSMUST00000104247 128 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm14885-201ENSMUST00000117969 496 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11923-201ENSMUST00000118135 508 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22310-201ENSMUST00000157509 116 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm17177-201ENSMUST00000169144 483 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm38332-201ENSMUST00000194189 147 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm43155-201ENSMUST00000202661 494 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm25205-201ENSMUST00000082841 103 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc3Q9D6Y1 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm24376-201ENSMUST00000104399 127 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm12691-201ENSMUST00000120186 456 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm15780-201ENSMUST00000121283 935 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11385-201ENSMUST00000121513 570 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm25150-201ENSMUST00000157121 60 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23957-201ENSMUST00000157209 90 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm25369-201ENSMUST00000158848 132 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm16026-202ENSMUST00000159695 772 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm32381-201ENSMUST00000203192 476 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm18672-201ENSMUST00000208035 270 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm45420-201ENSMUST00000211243 425 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm7639-201ENSMUST00000212608 484 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm4057-201ENSMUST00000221407 368 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc3Q9D6Y1 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.59□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Ccdc3Q9D6Y1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc3Q9D6Y1 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm23175-201ENSMUST00000104371 132 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm14975-201ENSMUST00000118741 664 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm14541-201ENSMUST00000118985 157 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm16005-201ENSMUST00000120515 269 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm27864-201ENSMUST00000183704 190 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm37828-201ENSMUST00000192496 432 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm45080-201ENSMUST00000206648 283 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44690-201ENSMUST00000207984 382 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm44887-201ENSMUST00000208980 178 ntBASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc3Q9D6Y1 Gm24626-201ENSMUST00000082621 161 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms