Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm15933-201ENSMUST00000117215 616 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm12105-201ENSMUST00000120846 779 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm15799-201ENSMUST00000120899 289 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm5379-201ENSMUST00000120973 826 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm23231-201ENSMUST00000157299 104 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm24505-201ENSMUST00000157682 126 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Mir1264-201ENSMUST00000175381 86 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm29634-201ENSMUST00000188467 696 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm28699-201ENSMUST00000189193 696 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm42850-201ENSMUST00000202094 201 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.44□□□□□ -1.7
Smc1aQ9CU62 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm23063-201ENSMUST00000102350 93 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm7421-201ENSMUST00000119298 639 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm7365-201ENSMUST00000120877 639 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm26045-201ENSMUST00000157862 97 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm24850-201ENSMUST00000158029 119 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm22156-201ENSMUST00000158409 141 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Mir3473c-201ENSMUST00000175262 81 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Mir6715-201ENSMUST00000184990 57 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm36964-201ENSMUST00000191876 198 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm7726-201ENSMUST00000206241 231 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm44946-201ENSMUST00000208425 572 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm29774-201ENSMUST00000219270 436 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm22444-201ENSMUST00000093693 108 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smc1aQ9CU62 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm23271-201ENSMUST00000104052 124 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm14816-201ENSMUST00000117174 294 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm649-201ENSMUST00000117284 1054 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm7219-201ENSMUST00000119619 297 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm6373-201ENSMUST00000121026 360 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm14845-201ENSMUST00000121259 306 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm25185-201ENSMUST00000157754 96 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm26028-201ENSMUST00000158660 294 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm3851-201ENSMUST00000168653 318 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm26460-201ENSMUST00000175061 126 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Mir1251-201ENSMUST00000175486 84 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm18415-201ENSMUST00000177464 647 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm25817-201ENSMUST00000177758 121 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm24766-201ENSMUST00000179182 121 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smc1aQ9CU62 Gm17790-201ENSMUST00000191545 1228 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms