Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm23178-201ENSMUST00000116782 95 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm11433-201ENSMUST00000118318 228 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm13155-201ENSMUST00000119277 646 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm8178-201ENSMUST00000121570 646 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm11645-201ENSMUST00000121589 649 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm9003-201ENSMUST00000121810 482 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm25603-201ENSMUST00000158361 105 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm24976-201ENSMUST00000158972 135 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm27695-201ENSMUST00000184301 91 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm5731-201ENSMUST00000190969 481 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm37603-201ENSMUST00000192368 219 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm43853-201ENSMUST00000197162 301 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm45162-201ENSMUST00000209013 618 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Use1Q9CQ56 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.6□□□□□ -1.83
Use1Q9CQ56 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Use1Q9CQ56 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Mir761-201ENSMUST00000103245 76 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm15151-201ENSMUST00000117106 177 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm14628-201ENSMUST00000117508 635 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm12994-201ENSMUST00000119601 447 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm5392-201ENSMUST00000122189 789 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm23123-201ENSMUST00000157648 144 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm24727-201ENSMUST00000158231 144 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm3053-201ENSMUST00000161709 616 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm17030-201ENSMUST00000167016 393 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Mir5134-201ENSMUST00000175529 78 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm6625-201ENSMUST00000177870 272 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm29534-201ENSMUST00000187328 382 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm28654-201ENSMUST00000189801 379 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm43155-201ENSMUST00000202661 494 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm8820-201ENSMUST00000204077 571 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm44583-201ENSMUST00000207478 281 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm19885-201ENSMUST00000212853 343 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.59□□□□□ -1.83
Use1Q9CQ56 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm31931-201ENSMUST00000219666 222 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm25200-201ENSMUST00000083094 130 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Snora31-201ENSMUST00000083213 130 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm26176-201ENSMUST00000083795 105 ntBASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Use1Q9CQ56 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Use1Q9CQ56 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.59□□□□□ -1.84
Use1Q9CQ56 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Use1Q9CQ56 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm23697-201ENSMUST00000103897 110 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm14050-201ENSMUST00000117052 346 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm16373-201ENSMUST00000129517 303 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm25913-201ENSMUST00000157617 135 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm23554-201ENSMUST00000157818 110 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm22637-201ENSMUST00000158144 283 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm25898-201ENSMUST00000158303 106 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm24739-201ENSMUST00000158855 292 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Use1Q9CQ56 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm21756-201ENSMUST00000178380 930 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm21405-201ENSMUST00000179024 930 ntBASIC3.58□□□□□ -1.84
Use1Q9CQ56 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms