Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm8224-201ENSMUST00000166178 497 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm7346-201ENSMUST00000169661 476 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm17771-201ENSMUST00000194477 1147 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC4.71□□□□□ -1.66
CopaQ8CIE6 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Mir5121-201ENSMUST00000198528 74 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC4.71□□□□□ -1.66
CopaQ8CIE6 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 AC166358.6-201ENSMUST00000221834 1206 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm24031-201ENSMUST00000083930 131 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.71□□□□□ -1.66
CopaQ8CIE6 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm23014-201ENSMUST00000104144 130 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm14706-201ENSMUST00000117744 255 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm12186-201ENSMUST00000119050 945 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Zakit-201ENSMUST00000157677 308 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm26373-201ENSMUST00000157833 103 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm25605-201ENSMUST00000158364 124 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm22177-201ENSMUST00000175002 158 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Mir7022-201ENSMUST00000183749 61 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm37979-201ENSMUST00000193065 712 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm44376-201ENSMUST00000197570 128 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm43005-201ENSMUST00000199015 648 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm43276-201ENSMUST00000199712 364 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm31931-201ENSMUST00000219666 222 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm6065-201ENSMUST00000081336 492 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gm24921-201ENSMUST00000083024 107 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.7□□□□□ -1.66
CopaQ8CIE6 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CopaQ8CIE6 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CopaQ8CIE6 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm14591-201ENSMUST00000120407 518 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm13132-201ENSMUST00000121194 472 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm4852-201ENSMUST00000121202 729 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm15111-201ENSMUST00000122142 878 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm25923-201ENSMUST00000158312 138 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm24675-201ENSMUST00000158757 259 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm3454-201ENSMUST00000185571 412 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.69□□□□□ -1.66
CopaQ8CIE6 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm8599-201ENSMUST00000193033 457 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm37272-201ENSMUST00000193401 488 ntBASIC4.69□□□□□ -1.66
CopaQ8CIE6 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms