Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29031-201ENSMUST00000185316 614 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm29000-201ENSMUST00000185444 614 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm28204-201ENSMUST00000185934 614 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm28290-201ENSMUST00000186505 614 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm28161-201ENSMUST00000186669 614 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm9775-201ENSMUST00000189402 331 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm28749-209ENSMUST00000189599 614 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm33163-201ENSMUST00000194504 614 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm2314-201ENSMUST00000200391 586 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm43580-201ENSMUST00000202892 284 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm46327-201ENSMUST00000218240 365 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm7034-201ENSMUST00000218638 645 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm3565-201ENSMUST00000222670 609 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Synpr-207ENSMUST00000223583 3362 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm7974-201ENSMUST00000117154 408 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm15553-201ENSMUST00000118757 430 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm12466-201ENSMUST00000121199 620 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm5974-201ENSMUST00000181607 986 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm4842-201ENSMUST00000183237 835 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm18117-201ENSMUST00000187720 742 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm28211-201ENSMUST00000190920 315 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm45226-201ENSMUST00000206602 288 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Gm12582-201ENSMUST00000030555 697 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Mir202-201ENSMUST00000083568 72 ntBASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Brf1Q8CFK2 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm24715-201ENSMUST00000102377 95 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm23424-201ENSMUST00000103889 110 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm25876-201ENSMUST00000104329 119 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm13321-201ENSMUST00000117101 400 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm12683-201ENSMUST00000117528 415 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm13379-201ENSMUST00000118053 621 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm15387-201ENSMUST00000120421 648 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Gm12706-201ENSMUST00000121588 698 ntBASIC5.3□□□□□ -1.56
Brf1Q8CFK2 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms