Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm19134-201ENSMUST00000221203 487 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm23928-201ENSMUST00000082469 145 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Mir342-201ENSMUST00000083502 99 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm10242-201ENSMUST00000090064 330 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm24160-201ENSMUST00000104594 126 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm16373-201ENSMUST00000129517 303 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm3191-201ENSMUST00000167139 346 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm22177-201ENSMUST00000175002 158 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm43104-201ENSMUST00000197234 311 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm18325-201ENSMUST00000203228 835 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm19253-201ENSMUST00000204279 307 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm44688-201ENSMUST00000209083 537 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Supt4b-201ENSMUST00000214434 351 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 AC153800.1-201ENSMUST00000219212 365 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm46998-201ENSMUST00000221444 330 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm7045-201ENSMUST00000221466 605 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Gm7204-201ENSMUST00000062591 600 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc28bQ8CEG5 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm13451-201ENSMUST00000117649 592 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm15385-201ENSMUST00000118725 667 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm14541-201ENSMUST00000118985 157 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm12287-201ENSMUST00000119770 707 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm15168-201ENSMUST00000121057 316 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm14977-201ENSMUST00000121626 812 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm25342-201ENSMUST00000157459 122 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm25908-201ENSMUST00000157624 98 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm26320-201ENSMUST00000157742 306 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm26352-201ENSMUST00000158223 125 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm25433-201ENSMUST00000158283 286 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm17155-201ENSMUST00000165969 473 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm25525-201ENSMUST00000177701 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm26178-201ENSMUST00000177706 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm26465-201ENSMUST00000178517 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm24317-201ENSMUST00000178536 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm25598-201ENSMUST00000179031 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm25021-201ENSMUST00000179184 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm22995-201ENSMUST00000179670 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm24424-201ENSMUST00000179714 107 ntBASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc28bQ8CEG5 Gm24389-201ENSMUST00000179962 107 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms