Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm14933-201ENSMUST00000118840 481 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm13603-201ENSMUST00000119404 83 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm5384-201ENSMUST00000120313 463 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm14360-201ENSMUST00000120670 393 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm15168-201ENSMUST00000121057 316 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm14649-201ENSMUST00000121814 324 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm20428-201ENSMUST00000174365 283 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm25534-201ENSMUST00000175365 125 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm26968-201ENSMUST00000182894 481 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm8823-201ENSMUST00000193158 433 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm42164-201ENSMUST00000198881 379 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm17915-201ENSMUST00000222077 548 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm26449-201ENSMUST00000082452 104 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm22287-201ENSMUST00000083197 107 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Gm6177-201ENSMUST00000085589 465 ntBASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trerf1Q8BXJ2 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Mir193b-201ENSMUST00000103784 79 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm22676-201ENSMUST00000116972 129 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm15480-201ENSMUST00000120442 519 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm18667-201ENSMUST00000186523 484 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm4412-201ENSMUST00000186660 433 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm3145-201ENSMUST00000188584 220 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm29263-201ENSMUST00000188718 463 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm37946-201ENSMUST00000192064 347 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm44449-201ENSMUST00000203610 153 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 AC139845.2-201ENSMUST00000227504 436 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm25404-201ENSMUST00000082970 107 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Gm24031-201ENSMUST00000083930 131 ntBASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trerf1Q8BXJ2 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm22272-201ENSMUST00000104039 134 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm23594-201ENSMUST00000104307 134 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm10552-201ENSMUST00000113396 372 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Mir467h-201ENSMUST00000116759 121 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm7834-201ENSMUST00000117560 437 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm14794-201ENSMUST00000118181 192 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm6664-201ENSMUST00000119138 468 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm15452-201ENSMUST00000119877 240 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm14927-201ENSMUST00000120283 454 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm15212-201ENSMUST00000122403 466 ntBASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trerf1Q8BXJ2 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms