Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm7530-201ENSMUST00000218466 605 ntBASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Gm6841-201ENSMUST00000220602 598 ntBASIC3.98□□□□□ -1.77
Nup54Q8BTS4 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nup54Q8BTS4 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nup54Q8BTS4 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.98□□□□□ -1.77
Nup54Q8BTS4 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Mir804-201ENSMUST00000103251 95 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm25765-201ENSMUST00000104100 132 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm11708-201ENSMUST00000119530 832 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm13973-201ENSMUST00000121371 894 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm11982-201ENSMUST00000121480 314 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm23702-201ENSMUST00000158840 130 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Mir713-201ENSMUST00000178651 108 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm28924-201ENSMUST00000190012 241 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm3489-201ENSMUST00000190083 528 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm37791-201ENSMUST00000195081 286 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm38018-201ENSMUST00000195651 540 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.97□□□□□ -1.77
Nup54Q8BTS4 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Nup54Q8BTS4 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
Nup54Q8BTS4 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Nup54Q8BTS4 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Nup54Q8BTS4 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm13831-201ENSMUST00000118764 302 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm26476-201ENSMUST00000122618 313 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm12226-201ENSMUST00000144172 876 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm22219-201ENSMUST00000157562 319 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm16563-201ENSMUST00000162673 423 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm27715-201ENSMUST00000184714 260 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm4854-201ENSMUST00000185902 574 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm42976-201ENSMUST00000200313 222 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm8774-201ENSMUST00000203621 692 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm44773-201ENSMUST00000207374 557 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm23975-201ENSMUST00000082685 106 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm26203-201ENSMUST00000082911 114 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup54Q8BTS4 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.95□□□□□ -1.78
Nup54Q8BTS4 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nup54Q8BTS4 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms