Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm14903-201ENSMUST00000122435 537 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm16359-201ENSMUST00000124511 289 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm26487-201ENSMUST00000158022 94 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm17030-201ENSMUST00000167016 393 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm25534-201ENSMUST00000175365 125 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm43649-201ENSMUST00000196596 391 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm17887-201ENSMUST00000200194 547 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm6064-201ENSMUST00000203999 454 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm18225-201ENSMUST00000216708 742 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm8249-201ENSMUST00000219225 465 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm8274-201ENSMUST00000219820 463 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm24067-201ENSMUST00000104514 85 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm25726-201ENSMUST00000104529 129 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm6429-201ENSMUST00000117144 475 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm8666-201ENSMUST00000117517 292 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm12467-201ENSMUST00000117625 745 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm11708-201ENSMUST00000119530 832 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm14383-201ENSMUST00000121637 386 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm25177-201ENSMUST00000122634 117 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm11281-201ENSMUST00000141391 576 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm2892-201ENSMUST00000145537 711 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Mir6996-201ENSMUST00000183922 61 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm2950-201ENSMUST00000185530 520 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm5552-201ENSMUST00000197149 515 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm43651-201ENSMUST00000199796 439 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm43368-201ENSMUST00000200638 409 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm18855-201ENSMUST00000206689 570 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm18602-201ENSMUST00000209794 851 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm18377-201ENSMUST00000215141 607 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm23928-201ENSMUST00000082469 145 ntBASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc40Q8BI79 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm23319-201ENSMUST00000104467 131 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm14050-201ENSMUST00000117052 346 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm14037-201ENSMUST00000120576 313 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm13131-201ENSMUST00000122228 321 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm6155-201ENSMUST00000173735 341 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm19807-201ENSMUST00000173971 667 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Mir5106-201ENSMUST00000174936 73 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm27875-201ENSMUST00000184425 123 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm28594-201ENSMUST00000187022 661 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm4045-201ENSMUST00000204076 310 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm17989-201ENSMUST00000211543 412 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.18□□□□□ -1.74
Ccdc40Q8BI79 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc40Q8BI79 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms