Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm13785-201ENSMUST00000119099 690 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm12564-201ENSMUST00000119860 321 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm23171-201ENSMUST00000157159 264 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm22793-201ENSMUST00000157227 330 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm22726-201ENSMUST00000158089 179 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm16490-201ENSMUST00000165299 351 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm20657-201ENSMUST00000177079 515 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm21850-201ENSMUST00000179792 359 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm25873-201ENSMUST00000180317 107 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Mir6926-201ENSMUST00000184562 68 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm17929-201ENSMUST00000186851 627 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm37878-201ENSMUST00000192108 387 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm42694-201ENSMUST00000196951 358 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm17956-201ENSMUST00000199931 838 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm45146-201ENSMUST00000207108 221 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm45742-201ENSMUST00000212400 433 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm46369-201ENSMUST00000221577 401 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm24490-201ENSMUST00000083803 98 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm23516-201ENSMUST00000093728 107 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm25537-201ENSMUST00000103851 109 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm14304-201ENSMUST00000117272 446 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm4852-201ENSMUST00000121202 729 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm6486-201ENSMUST00000166202 434 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm22243-201ENSMUST00000178754 120 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm22307-201ENSMUST00000180019 107 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm42805-201ENSMUST00000196158 276 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm44261-201ENSMUST00000203337 209 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm45226-201ENSMUST00000206602 288 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 AC170810.3-201ENSMUST00000226177 374 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 AC166344.2-201ENSMUST00000226747 374 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ubfd1Q78JW9 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ubfd1Q78JW9 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.5□□□□□ -1.69
Ubfd1Q78JW9 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ubfd1Q78JW9 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms