Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm7381-201ENSMUST00000098958 300 ntBASIC5.18□□□□□ -1.58
Ddx58Q6Q899 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx58Q6Q899 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.18□□□□□ -1.58
Ddx58Q6Q899 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx58Q6Q899 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.18□□□□□ -1.58
Ddx58Q6Q899 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.18□□□□□ -1.58
Ddx58Q6Q899 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx58Q6Q899 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm6913-201ENSMUST00000100019 348 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm14142-201ENSMUST00000117833 296 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm15916-201ENSMUST00000118355 736 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm11252-201ENSMUST00000120572 939 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm3496-201ENSMUST00000188283 745 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm43730-201ENSMUST00000199863 372 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm42666-201ENSMUST00000201954 152 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 AC102352.1-201ENSMUST00000224187 582 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm24254-201ENSMUST00000083702 104 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Neat1-201ENSMUST00000173672 20771 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.17□□□□□ -1.58
Ddx58Q6Q899 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddx58Q6Q899 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm14903-201ENSMUST00000122435 537 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm22968-201ENSMUST00000157955 118 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Mir6907-201ENSMUST00000183764 71 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Mir6345-201ENSMUST00000184286 128 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm28625-201ENSMUST00000188309 205 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm38080-201ENSMUST00000194035 268 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm17887-201ENSMUST00000200194 547 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm8820-201ENSMUST00000204077 571 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm45071-201ENSMUST00000205353 571 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm18410-201ENSMUST00000207199 577 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm3690-201ENSMUST00000211341 262 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm29774-201ENSMUST00000219270 436 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 AC118006.2-201ENSMUST00000224167 962 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Mir34b-201ENSMUST00000083558 84 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm21286-201ENSMUST00000098035 545 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.16□□□□□ -1.58
Ddx58Q6Q899 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Ddx58Q6Q899 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.15□□□□□ -1.58
Ddx58Q6Q899 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ddx58Q6Q899 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.15□□□□□ -1.58
Ddx58Q6Q899 Gm24281-201ENSMUST00000104234 136 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm5757-201ENSMUST00000117494 528 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm13478-201ENSMUST00000118312 413 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm14103-201ENSMUST00000119075 366 ntBASIC5.15□□□□□ -1.59
Ddx58Q6Q899 Gm12885-201ENSMUST00000122246 328 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms