Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm34005-201ENSMUST00000215834 282 ntBASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm26387-201ENSMUST00000104238 132 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm22676-201ENSMUST00000116972 129 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm11874-201ENSMUST00000117437 130 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm6584-201ENSMUST00000119671 447 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm12543-201ENSMUST00000120410 543 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm15780-201ENSMUST00000121283 935 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm22789-201ENSMUST00000157884 130 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm27445-201ENSMUST00000184484 72 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Mir6933-201ENSMUST00000184982 81 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm6947-201ENSMUST00000186254 78 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm22897-201ENSMUST00000197860 128 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44403-201ENSMUST00000198554 129 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm43975-201ENSMUST00000203023 481 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm45539-201ENSMUST00000210313 428 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm8106-201ENSMUST00000213123 523 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm18487-201ENSMUST00000215826 878 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm5917-201ENSMUST00000217638 721 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Snora31-201ENSMUST00000083213 130 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm25581-201ENSMUST00000083410 164 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Snord15a-201ENSMUST00000083888 148 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm10704-201ENSMUST00000098952 730 ntBASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trav5d-4Q5R1F6 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm24382-201ENSMUST00000122698 107 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm16101-201ENSMUST00000160695 430 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm24811-201ENSMUST00000175313 100 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm37617-201ENSMUST00000194309 159 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm42850-201ENSMUST00000202094 201 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trav5d-4Q5R1F6 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm336-201ENSMUST00000186376 1480 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Mir690-201ENSMUST00000102110 109 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm23256-201ENSMUST00000102235 110 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm26140-201ENSMUST00000103807 110 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm11704-201ENSMUST00000120031 214 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm23084-201ENSMUST00000157850 114 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm23897-201ENSMUST00000158110 158 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm24739-201ENSMUST00000158855 292 ntBASIC3.05□□□□□ -1.92
Trav5d-4Q5R1F6 Gm16490-201ENSMUST00000165299 351 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms