Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm27976-201ENSMUST00000183635 162 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm19726-201ENSMUST00000205008 240 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm44002-201ENSMUST00000205134 594 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 AC161114.1-201ENSMUST00000218223 474 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 AC160980.2-201ENSMUST00000225131 949 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm24207-201ENSMUST00000082781 108 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm24410-201ENSMUST00000083433 107 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 n-R5s13-201ENSMUST00000093707 119 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Fam26d-202ENSMUST00000218239 3075 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Gm37244-201ENSMUST00000191748 1981 ntBASIC9.79□□□□□ -0.84
Trim41Q5NCC3 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm24889-201ENSMUST00000104388 132 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm12042-201ENSMUST00000120479 301 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm26098-201ENSMUST00000157247 288 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm23538-201ENSMUST00000157535 101 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm23901-201ENSMUST00000157570 107 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Mir1945-201ENSMUST00000157919 78 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm3170-201ENSMUST00000168753 850 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm3348-201ENSMUST00000177813 850 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm28283-201ENSMUST00000185509 178 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm44539-201ENSMUST00000206010 238 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 AC154627.3-201ENSMUST00000228441 334 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm23412-201ENSMUST00000083017 107 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 AC164102.1-201ENSMUST00000220524 1553 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm43857-201ENSMUST00000200343 3079 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Gm38362-201ENSMUST00000192999 2064 ntBASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trim41Q5NCC3 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim41Q5NCC3 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim41Q5NCC3 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trim41Q5NCC3 Gm45548-201ENSMUST00000210076 3167 ntBASIC9.77□□□□□ -0.84
Trim41Q5NCC3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trim41Q5NCC3 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Mir208b-201ENSMUST00000104735 77 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm14933-201ENSMUST00000118840 481 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm15400-201ENSMUST00000118944 601 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm12691-201ENSMUST00000120186 456 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm22870-201ENSMUST00000157501 112 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Mir6382-201ENSMUST00000184055 110 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29512-201ENSMUST00000185544 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28781-201ENSMUST00000185760 696 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28110-201ENSMUST00000185782 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28838-201ENSMUST00000186338 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29057-201ENSMUST00000186468 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29661-201ENSMUST00000186781 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28737-201ENSMUST00000186808 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29118-201ENSMUST00000186908 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28433-201ENSMUST00000187085 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29635-201ENSMUST00000187221 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29307-201ENSMUST00000187367 696 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28759-201ENSMUST00000187621 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28831-201ENSMUST00000187739 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28200-201ENSMUST00000187778 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29026-201ENSMUST00000187787 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28752-201ENSMUST00000188340 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28797-201ENSMUST00000188543 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28855-201ENSMUST00000188680 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29378-201ENSMUST00000188723 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28569-201ENSMUST00000188748 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28120-201ENSMUST00000188812 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28369-201ENSMUST00000188993 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29037-201ENSMUST00000189092 313 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28909-201ENSMUST00000189406 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm28705-201ENSMUST00000189548 315 ntBASIC9.77□□□□□ -0.85
Trim41Q5NCC3 Gm29339-201ENSMUST00000189613 696 ntBASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 122.5 ms