Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm13155-201ENSMUST00000119277 646 ntBASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Gm8178-201ENSMUST00000121570 646 ntBASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Gm22956-201ENSMUST00000122520 80 ntBASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Gm23671-201ENSMUST00000157472 103 ntBASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Gm27783-201ENSMUST00000183534 105 ntBASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 AC166369.3-201ENSMUST00000227286 409 ntBASIC5.63□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm28030-201ENSMUST00000184987 138 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm6947-201ENSMUST00000186254 78 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm46233-201ENSMUST00000217831 449 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm24950-201ENSMUST00000082768 191 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm23971-201ENSMUST00000083317 191 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm23849-201ENSMUST00000083833 191 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm26316-201ENSMUST00000083886 191 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC5.62□□□□□ -1.51
Ccdc88bQ4QRL3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm6893-201ENSMUST00000118385 522 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Mir5127-201ENSMUST00000175295 71 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm23402-201ENSMUST00000178130 107 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm24019-201ENSMUST00000178620 107 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm26243-201ENSMUST00000179260 107 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm27532-201ENSMUST00000183726 113 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm44887-201ENSMUST00000208980 178 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm23296-201ENSMUST00000082555 107 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Gm24859-201ENSMUST00000082729 107 ntBASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc88bQ4QRL3 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm13761-201ENSMUST00000117238 807 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm22722-201ENSMUST00000157467 132 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm22833-201ENSMUST00000158292 132 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm27374-201ENSMUST00000183660 81 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 AC153564.2-201ENSMUST00000219464 273 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 CT009604.2-201ENSMUST00000225531 377 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 AC147628.1-201ENSMUST00000228193 688 ntBASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc88bQ4QRL3 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Ear-ps10-201ENSMUST00000161871 460 ntBASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Snord92-201ENSMUST00000175548 85 ntBASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Gm8681-201ENSMUST00000219115 618 ntBASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc88bQ4QRL3 Gm43958-201ENSMUST00000204360 3544 ntBASIC5.59□□□□□ -1.52
Ccdc88bQ4QRL3 Gm12467-201ENSMUST00000117625 745 ntBASIC5.58□□□□□ -1.52
Ccdc88bQ4QRL3 Gm14570-201ENSMUST00000119444 391 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 242.5 ms