Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm5929-201ENSMUST00000166883 487 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm3191-201ENSMUST00000167139 346 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm9613-201ENSMUST00000171662 196 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm24080-201ENSMUST00000175178 232 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm8604-201ENSMUST00000183150 965 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm27190-201ENSMUST00000184890 542 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm28688-201ENSMUST00000187301 268 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm23925-202ENSMUST00000188429 132 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm38231-201ENSMUST00000192030 347 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm38213-201ENSMUST00000193203 173 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm35702-201ENSMUST00000198653 511 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm8209-201ENSMUST00000206386 553 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm45458-201ENSMUST00000209900 522 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm18320-201ENSMUST00000211304 595 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm18850-201ENSMUST00000211578 388 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm6369-201ENSMUST00000069626 412 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm23456-201ENSMUST00000083335 137 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.77□□□□□ -1.81
Trim40Q3UWA4 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 BC051076-202ENSMUST00000199477 2868 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm14931-201ENSMUST00000111079 253 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm11366-201ENSMUST00000119279 429 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm5384-201ENSMUST00000120313 463 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm14989-201ENSMUST00000120497 207 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm1866-201ENSMUST00000120701 477 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm8244-201ENSMUST00000121254 264 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm23777-201ENSMUST00000158994 259 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm22355-201ENSMUST00000175531 96 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm27580-201ENSMUST00000183666 149 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm21735-201ENSMUST00000190360 696 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm18181-201ENSMUST00000190670 736 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm44343-201ENSMUST00000196702 90 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm42526-201ENSMUST00000198956 393 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm43975-201ENSMUST00000203023 481 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm18540-201ENSMUST00000204025 526 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm45523-201ENSMUST00000210712 799 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm5358-201ENSMUST00000212814 353 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 AC134537.2-201ENSMUST00000217770 575 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 AC109180.1-201ENSMUST00000218676 398 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm23928-201ENSMUST00000082469 145 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Gm22868-201ENSMUST00000083955 164 ntBASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim40Q3UWA4 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm11984-201ENSMUST00000118142 766 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm13471-201ENSMUST00000122057 433 ntBASIC3.75□□□□□ -1.81
Trim40Q3UWA4 Gm22988-201ENSMUST00000122759 144 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms