Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm14991-201ENSMUST00000119913 598 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm11718-201ENSMUST00000119942 537 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm15263-201ENSMUST00000121556 642 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Snora81-201ENSMUST00000157310 178 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm23781-201ENSMUST00000157940 308 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm26352-201ENSMUST00000158223 125 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Mir1264-201ENSMUST00000175381 86 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm43345-201ENSMUST00000199484 269 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm42453-201ENSMUST00000200477 409 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm44332-201ENSMUST00000203712 433 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm7468-201ENSMUST00000203900 652 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm8820-201ENSMUST00000204077 571 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm44521-201ENSMUST00000206469 217 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm18194-201ENSMUST00000210455 481 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm29774-201ENSMUST00000219270 436 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 AC131743.3-201ENSMUST00000222099 662 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trafd1Q3UDK1 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm26075-201ENSMUST00000104062 121 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm26387-201ENSMUST00000104238 132 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm13650-201ENSMUST00000117729 433 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm12230-201ENSMUST00000118301 454 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm23098-201ENSMUST00000157552 299 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm6650-201ENSMUST00000166710 614 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm26460-201ENSMUST00000175061 126 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm25525-201ENSMUST00000177701 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm26178-201ENSMUST00000177706 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm26465-201ENSMUST00000178517 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm24317-201ENSMUST00000178536 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm25021-201ENSMUST00000179184 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm22995-201ENSMUST00000179670 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm24424-201ENSMUST00000179714 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm24389-201ENSMUST00000179962 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm25672-201ENSMUST00000180111 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm27155-201ENSMUST00000183716 898 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm29163-201ENSMUST00000188029 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm3496-201ENSMUST00000188283 745 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm28500-201ENSMUST00000190286 151 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Mir142-201ENSMUST00000198092 64 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm19761-201ENSMUST00000205372 391 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm44871-201ENSMUST00000207821 497 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm44954-201ENSMUST00000208513 227 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm45162-201ENSMUST00000209013 618 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm23443-201ENSMUST00000082916 128 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm23815-201ENSMUST00000083231 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Gm23520-201ENSMUST00000093736 107 ntBASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trafd1Q3UDK1 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms