Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim43aQ3TL54 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Trim43aQ3TL54 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim43aQ3TL54 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim43aQ3TL54 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim43aQ3TL54 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim43aQ3TL54 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm12427-201ENSMUST00000117719 302 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm8475-201ENSMUST00000118211 526 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm13122-201ENSMUST00000118380 453 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm10357-201ENSMUST00000159886 264 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm16101-201ENSMUST00000160695 430 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm7094-201ENSMUST00000178379 366 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm43494-201ENSMUST00000197672 388 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm7099-201ENSMUST00000080066 554 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm22245-201ENSMUST00000082479 103 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm10242-201ENSMUST00000090064 330 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Gm44624-201ENSMUST00000208700 2278 ntBASIC3.91□□□□□ -1.78
Trim43aQ3TL54 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim43aQ3TL54 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim43aQ3TL54 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim43aQ3TL54 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm5757-201ENSMUST00000117494 528 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm14119-201ENSMUST00000119511 235 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm13973-201ENSMUST00000121371 894 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm24666-201ENSMUST00000158937 167 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm37603-201ENSMUST00000192368 219 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm38330-201ENSMUST00000192743 959 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Gm3829-201ENSMUST00000222362 619 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim43aQ3TL54 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm12900-201ENSMUST00000120919 573 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm23098-201ENSMUST00000157552 299 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm22519-201ENSMUST00000158270 178 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm20542-201ENSMUST00000174582 372 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Mir5098-201ENSMUST00000175320 82 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Mir1251-201ENSMUST00000175486 84 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm25942-201ENSMUST00000180080 110 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm3454-201ENSMUST00000185571 412 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm37575-201ENSMUST00000195467 309 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm17829-201ENSMUST00000219782 344 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm23460-201ENSMUST00000083258 109 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm24319-201ENSMUST00000083389 107 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Mir132-201ENSMUST00000083603 66 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim43aQ3TL54 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.88□□□□□ -1.79
Trim43aQ3TL54 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim43aQ3TL54 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.88□□□□□ -1.79
Trim43aQ3TL54 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim43aQ3TL54 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.88□□□□□ -1.79
Trim43aQ3TL54 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms