Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col8a1Q00780 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm8724-201ENSMUST00000081668 483 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm23406-201ENSMUST00000082537 122 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Gm24042-201ENSMUST00000083114 103 ntBASIC4.59□□□□□ -1.67
Col8a1Q00780 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Col8a1Q00780 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Col8a1Q00780 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm11898-201ENSMUST00000117161 385 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm13733-201ENSMUST00000117290 535 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm13228-201ENSMUST00000118937 634 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm12739-201ENSMUST00000119769 382 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm14761-201ENSMUST00000121363 262 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm23118-201ENSMUST00000122657 187 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm22563-201ENSMUST00000157333 269 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm22916-201ENSMUST00000157616 119 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm15812-201ENSMUST00000162331 748 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm25314-201ENSMUST00000178810 79 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28146-201ENSMUST00000185517 701 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28574-201ENSMUST00000185757 699 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm29045-201ENSMUST00000187278 698 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28397-201ENSMUST00000187970 699 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm29366-201ENSMUST00000190481 699 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm45209-201ENSMUST00000207122 353 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm18120-201ENSMUST00000220079 511 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col8a1Q00780 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.58□□□□□ -1.68
Col8a1Q00780 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col8a1Q00780 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col8a1Q00780 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm25418-201ENSMUST00000104214 129 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm15382-201ENSMUST00000118011 537 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm13085-201ENSMUST00000118356 171 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm14874-201ENSMUST00000118995 438 ntBASIC4.57□□□□□ -1.68
Col8a1Q00780 Gm13475-201ENSMUST00000119290 234 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms