Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SgcbP82349 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SgcbP82349 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SgcbP82349 Gm24886-201ENSMUST00000104384 123 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.06□□□□□ -1.6
SgcbP82349 Gm14706-201ENSMUST00000117744 255 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm11936-201ENSMUST00000118323 160 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm4989-201ENSMUST00000118711 749 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm12137-201ENSMUST00000119565 346 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm11227-201ENSMUST00000119774 471 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm6175-201ENSMUST00000121351 400 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm14101-201ENSMUST00000121502 473 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.06□□□□□ -1.6
SgcbP82349 Gm25152-201ENSMUST00000157117 114 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm23539-201ENSMUST00000157537 224 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm16569-201ENSMUST00000160526 314 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SgcbP82349 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SgcbP82349 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.06□□□□□ -1.6
SgcbP82349 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm20401-201ENSMUST00000173717 212 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SgcbP82349 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.06□□□□□ -1.6
SgcbP82349 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SgcbP82349 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm42776-201ENSMUST00000198031 406 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.06□□□□□ -1.6
SgcbP82349 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.06□□□□□ -1.6
SgcbP82349 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.06□□□□□ -1.6
SgcbP82349 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm5045-201ENSMUST00000027054 810 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SgcbP82349 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SgcbP82349 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SgcbP82349 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SgcbP82349 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.06□□□□□ -1.6
SgcbP82349 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SgcbP82349 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
SgcbP82349 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SgcbP82349 Gm26146-201ENSMUST00000104478 185 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm12482-201ENSMUST00000120435 630 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm12693-201ENSMUST00000121965 483 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 Gm24441-201ENSMUST00000157235 281 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm24060-201ENSMUST00000157494 95 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm24240-201ENSMUST00000157785 135 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm26372-201ENSMUST00000157831 236 ntBASIC5.05□□□□□ -1.6
SgcbP82349 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 Gm6632-201ENSMUST00000168425 954 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SgcbP82349 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Gm27158-201ENSMUST00000183813 238 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Mir7008-201ENSMUST00000184398 63 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Gm8419-201ENSMUST00000189886 412 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm38015-201ENSMUST00000193048 188 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm18427-201ENSMUST00000195422 515 ntBASIC5.05□□□□□ -1.6
SgcbP82349 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.05□□□□□ -1.6
SgcbP82349 Mir7227-201ENSMUST00000200408 59 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm8039-201ENSMUST00000204758 712 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 LOC665443-201ENSMUST00000212284 796 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm45730-201ENSMUST00000212560 395 ntBASIC5.05□□□□□ -1.6
SgcbP82349 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm19195-201ENSMUST00000222018 511 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm6988-201ENSMUST00000222676 375 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm8288-201ENSMUST00000223406 593 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Gm23412-201ENSMUST00000083017 107 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
SgcbP82349 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SgcbP82349 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SgcbP82349 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SgcbP82349 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.05□□□□□ -1.6
SgcbP82349 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SgcbP82349 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.05□□□□□ -1.6
SgcbP82349 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SgcbP82349 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SgcbP82349 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SgcbP82349 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms