Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm13867-201ENSMUST00000120844 395 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm11260-201ENSMUST00000121163 942 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm12893-201ENSMUST00000121732 275 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm12650-201ENSMUST00000121966 258 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm22106-201ENSMUST00000122544 127 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm24198-201ENSMUST00000157812 108 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm26960-201ENSMUST00000182263 412 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Mir7012-201ENSMUST00000183900 64 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm29740-201ENSMUST00000193182 655 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm19131-201ENSMUST00000203408 789 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm5322-201ENSMUST00000206142 699 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb1P63158 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb1P63158 AC168880.1-201ENSMUST00000225113 707 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 AC158981.3-201ENSMUST00000226844 1024 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 AC154419.1-201ENSMUST00000227627 272 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb1P63158 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb1P63158 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb1P63158 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.3□□□□□ -1.56
Hmgb1P63158 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb1P63158 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm7648-201ENSMUST00000173036 1658 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.29□□□□□ -1.56
Hmgb1P63158 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm12901-201ENSMUST00000118690 532 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm15854-201ENSMUST00000118879 808 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm15745-201ENSMUST00000119807 115 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm6079-201ENSMUST00000121356 404 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm12998-201ENSMUST00000122445 789 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm22940-201ENSMUST00000158560 155 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Ear-ps3-201ENSMUST00000168308 445 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm23152-201ENSMUST00000175322 116 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm29668-201ENSMUST00000187802 315 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm46436-201ENSMUST00000221851 1294 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hmgb1P63158 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm24622-201ENSMUST00000082619 162 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hmgb1P63158 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hmgb1P63158 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.29□□□□□ -1.56
Hmgb1P63158 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm25213-201ENSMUST00000102388 113 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm10552-201ENSMUST00000113396 372 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb1P63158 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm14995-201ENSMUST00000117135 391 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm13250-201ENSMUST00000117209 753 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm14537-201ENSMUST00000117464 599 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm5646-201ENSMUST00000120568 714 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm11804-201ENSMUST00000121663 468 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm25341-201ENSMUST00000157461 268 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm26169-201ENSMUST00000158420 135 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm20415-201ENSMUST00000172877 423 ntBASIC5.28□□□□□ -1.56
Hmgb1P63158 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.28□□□□□ -1.56
Hmgb1P63158 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms