Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cux1P53564 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cux1P53564 Gm28785-201ENSMUST00000187478 379 ntBASIC5.2□□□□□ -1.58
Cux1P53564 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.2□□□□□ -1.58
Cux1P53564 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cux1P53564 Gm24950-201ENSMUST00000082768 191 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Gm23971-201ENSMUST00000083317 191 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Gm23849-201ENSMUST00000083833 191 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Gm22154-201ENSMUST00000083844 131 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Gm26316-201ENSMUST00000083886 191 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Rnu2-10-201ENSMUST00000084010 191 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Gm24817-201ENSMUST00000093672 105 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC5.2□□□□□ -1.58
Cux1P53564 Gm18609-201ENSMUST00000203370 3601 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cux1P53564 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cux1P53564 Gm38083-201ENSMUST00000194758 3498 ntBASIC5.2□□□□□ -1.58
Cux1P53564 Gm36944-201ENSMUST00000192257 2759 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Gm13155-201ENSMUST00000119277 646 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Gm8178-201ENSMUST00000121570 646 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Gm14162-201ENSMUST00000121985 601 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Gm18522-201ENSMUST00000173947 650 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Mir6413-201ENSMUST00000184049 108 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Mir6916-201ENSMUST00000184514 63 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Gm27538-201ENSMUST00000185065 294 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Gm18585-201ENSMUST00000215197 556 ntBASIC5.19□□□□□ -1.58
Cux1P53564 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cux1P53564 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cux1P53564 Gm22979-201ENSMUST00000082609 159 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cux1P53564 AC126033.1-201ENSMUST00000227628 6773 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Cux1P53564 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cux1P53564 Gm42479-201ENSMUST00000198654 1356 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cux1P53564 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.19□□□□□ -1.58
Cux1P53564 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cux1P53564 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Cux1P53564 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cux1P53564 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm12358-201ENSMUST00000121842 520 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm25843-201ENSMUST00000122582 314 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm22311-201ENSMUST00000158006 110 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm25438-201ENSMUST00000158281 110 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Mir6715-201ENSMUST00000184990 57 ntBASIC5.18□□□□□ -1.58
Cux1P53564 AC157572.3-201ENSMUST00000227288 303 ntBASIC5.18□□□□□ -1.58
Cux1P53564 BC023105-201ENSMUST00000073997 1227 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cux1P53564 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cux1P53564 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cux1P53564 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cux1P53564 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cux1P53564 CT010444.1-201ENSMUST00000219963 3845 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm14901-201ENSMUST00000119001 283 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm23592-201ENSMUST00000157859 117 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm23380-201ENSMUST00000158448 103 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm28118-201ENSMUST00000185957 294 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm8282-201ENSMUST00000187559 483 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.18□□□□□ -1.58
Cux1P53564 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.18□□□□□ -1.58
Cux1P53564 Gm19104-201ENSMUST00000198392 679 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm42665-201ENSMUST00000202100 586 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Gm42758-201ENSMUST00000202146 283 ntBASIC5.18□□□□□ -1.58
Cux1P53564 AC162934.1-201ENSMUST00000222880 309 ntBASIC5.18□□□□□ -1.58
Cux1P53564 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.18□□□□□ -1.58
Cux1P53564 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.18□□□□□ -1.58
Cux1P53564 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cux1P53564 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cux1P53564 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Cux1P53564 Gm38286-201ENSMUST00000195128 3105 ntBASIC5.17□□□□□ -1.58
Cux1P53564 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cux1P53564 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cux1P53564 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cux1P53564 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cux1P53564 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC5.17□□□□□ -1.58
Cux1P53564 Mir6917-201ENSMUST00000184111 61 ntBASIC5.17□□□□□ -1.58
Cux1P53564 Mir6914-201ENSMUST00000184999 69 ntBASIC5.17□□□□□ -1.58
Cux1P53564 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC5.17□□□□□ -1.58
Cux1P53564 Gm43596-201ENSMUST00000202818 884 ntBASIC5.17□□□□□ -1.58
Cux1P53564 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC5.17□□□□□ -1.58
Cux1P53564 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cux1P53564 CT030161.1-201ENSMUST00000218411 124 ntBASIC5.17□□□□□ -1.58
Cux1P53564 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cux1P53564 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cux1P53564 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cux1P53564 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cux1P53564 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cux1P53564 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cux1P53564 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.16□□□□□ -1.58
Cux1P53564 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cux1P53564 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.16□□□□□ -1.58
Cux1P53564 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.16□□□□□ -1.58
Cux1P53564 Gm24138-201ENSMUST00000157572 114 ntBASIC5.16□□□□□ -1.58
Cux1P53564 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cux1P53564 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cux1P53564 Mir7081-201ENSMUST00000184490 75 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms