Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Cdx2P43241 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Cdx2P43241 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm22023-201ENSMUST00000104354 130 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx2P43241 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm11408-201ENSMUST00000117889 519 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdx2P43241 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Gm29552-201ENSMUST00000190548 660 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Gm18900-201ENSMUST00000193218 584 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm42526-201ENSMUST00000198956 393 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdx2P43241 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm44754-201ENSMUST00000208155 400 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.46□□□□□ -1.86
Cdx2P43241 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx2P43241 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx2P43241 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx2P43241 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.46□□□□□ -1.86
Cdx2P43241 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Cdx2P43241 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdx2P43241 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cdx2P43241 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdx2P43241 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx2P43241 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Cdx2P43241 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm22472-201ENSMUST00000104115 134 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm14890-201ENSMUST00000117660 676 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm12902-201ENSMUST00000118389 322 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.45□□□□□ -1.86
Cdx2P43241 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm24059-201ENSMUST00000157493 312 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm24138-201ENSMUST00000157572 114 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm24898-201ENSMUST00000158133 106 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm28094-201ENSMUST00000185262 390 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm5983-201ENSMUST00000197739 770 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Gm19269-201ENSMUST00000211401 804 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx2P43241 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx2P43241 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm25099-201ENSMUST00000093716 116 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Cdx2P43241 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdx2P43241 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.45□□□□□ -1.86
Cdx2P43241 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Cdx2P43241 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx2P43241 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx2P43241 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx2P43241 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx2P43241 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdx2P43241 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Gm6274-201ENSMUST00000118173 797 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Gm6565-201ENSMUST00000121217 438 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Gm12095-201ENSMUST00000121962 816 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx2P43241 Gm23753-201ENSMUST00000157575 149 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Gm24976-201ENSMUST00000158972 135 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdx2P43241 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx2P43241 Gm29038-201ENSMUST00000191543 678 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx2P43241 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx2P43241 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.44□□□□□ -1.86
Cdx2P43241 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms