Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm11625-201ENSMUST00000119535 296 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sox6P40645 Gm25971-201ENSMUST00000158953 286 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm7241-201ENSMUST00000159853 357 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sox6P40645 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sox6P40645 Gm22908-201ENSMUST00000177620 110 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm22108-201ENSMUST00000177961 106 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm24798-201ENSMUST00000179334 106 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.58□□□□□ -1.84
Sox6P40645 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sox6P40645 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.58□□□□□ -1.84
Sox6P40645 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.58□□□□□ -1.84
Sox6P40645 Gm7449-201ENSMUST00000194393 663 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Sox6P40645 Gm43604-201ENSMUST00000199799 705 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm43975-201ENSMUST00000203023 481 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.58□□□□□ -1.84
Sox6P40645 Gm31532-201ENSMUST00000203555 767 ntBASIC3.58□□□□□ -1.84
Sox6P40645 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sox6P40645 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sox6P40645 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sox6P40645 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sox6P40645 Gm24144-201ENSMUST00000082632 111 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm25810-201ENSMUST00000082752 108 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.58□□□□□ -1.84
Sox6P40645 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.58□□□□□ -1.84
Sox6P40645 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sox6P40645 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sox6P40645 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sox6P40645 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sox6P40645 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sox6P40645 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sox6P40645 Gm11923-201ENSMUST00000118135 508 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm14172-201ENSMUST00000118255 644 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm12252-201ENSMUST00000119517 219 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm11890-201ENSMUST00000119585 417 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm22613-201ENSMUST00000122679 292 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm3160-201ENSMUST00000128343 607 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sox6P40645 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sox6P40645 Gm22816-201ENSMUST00000157450 117 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sox6P40645 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sox6P40645 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.57□□□□□ -1.84
Sox6P40645 Gm25525-201ENSMUST00000177701 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm26178-201ENSMUST00000177706 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm26465-201ENSMUST00000178517 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm24317-201ENSMUST00000178536 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm25021-201ENSMUST00000179184 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm22995-201ENSMUST00000179670 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm24424-201ENSMUST00000179714 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm24389-201ENSMUST00000179962 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm25672-201ENSMUST00000180111 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Sox6P40645 Gm29163-201ENSMUST00000188029 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm18547-201ENSMUST00000192439 811 ntBASIC3.57□□□□□ -1.84
Sox6P40645 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sox6P40645 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.57□□□□□ -1.84
Sox6P40645 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sox6P40645 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.57□□□□□ -1.84
Sox6P40645 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC3.57□□□□□ -1.84
Sox6P40645 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.57□□□□□ -1.84
Sox6P40645 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.57□□□□□ -1.84
Sox6P40645 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.57□□□□□ -1.84
Sox6P40645 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.57□□□□□ -1.84
Sox6P40645 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.57□□□□□ -1.84
Sox6P40645 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm23815-201ENSMUST00000083231 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm26064-201ENSMUST00000083381 109 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Gm23520-201ENSMUST00000093736 107 ntBASIC3.57□□□□□ -1.84
Sox6P40645 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sox6P40645 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.56□□□□□ -1.84
Sox6P40645 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Sox6P40645 Gm24935-201ENSMUST00000103770 110 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm24281-201ENSMUST00000104234 136 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm11874-201ENSMUST00000117437 130 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm11433-201ENSMUST00000118318 228 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm5963-201ENSMUST00000143451 236 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm23228-201ENSMUST00000157296 270 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm26045-201ENSMUST00000157862 97 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sox6P40645 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm24811-201ENSMUST00000175313 100 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Mir6345-201ENSMUST00000184286 128 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Mir6899-201ENSMUST00000184798 64 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm38201-201ENSMUST00000192143 387 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm3010-201ENSMUST00000198805 448 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Gm44232-201ENSMUST00000204537 225 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.56□□□□□ -1.84
Sox6P40645 Gm7726-201ENSMUST00000206241 231 ntBASIC3.56□□□□□ -1.84
Sox6P40645 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.56□□□□□ -1.84
Sox6P40645 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms