Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm28997-201ENSMUST00000188759 429 ntBASIC3.47□□□□□ -1.85
P20040 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.47□□□□□ -1.85
P20040 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.47□□□□□ -1.85
P20040 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
P20040 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
P20040 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.47□□□□□ -1.85
P20040 Gm19232-201ENSMUST00000211621 652 ntBASIC3.47□□□□□ -1.85
P20040 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.47□□□□□ -1.85
P20040 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.47□□□□□ -1.85
P20040 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 Gm46998-201ENSMUST00000221444 330 ntBASIC3.47□□□□□ -1.85
P20040 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.47□□□□□ -1.85
P20040 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
P20040 Gm5548-201ENSMUST00000055878 397 ntBASIC3.47□□□□□ -1.85
P20040 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 Gm25581-201ENSMUST00000083410 164 ntBASIC3.47□□□□□ -1.85
P20040 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.47□□□□□ -1.85
P20040 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
P20040 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
P20040 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.47□□□□□ -1.85
P20040 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
P20040 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.47□□□□□ -1.85
P20040 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
P20040 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
P20040 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.46□□□□□ -1.86
P20040 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
P20040 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
P20040 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
P20040 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
P20040 Gm12252-201ENSMUST00000119517 219 ntBASIC3.46□□□□□ -1.86
P20040 Gm11708-201ENSMUST00000119530 832 ntBASIC3.46□□□□□ -1.86
P20040 Gm5392-201ENSMUST00000122189 789 ntBASIC3.46□□□□□ -1.86
P20040 Gm13131-201ENSMUST00000122228 321 ntBASIC3.46□□□□□ -1.86
P20040 Gm14473-201ENSMUST00000122269 557 ntBASIC3.46□□□□□ -1.86
P20040 Gm22204-201ENSMUST00000122654 327 ntBASIC3.46□□□□□ -1.86
P20040 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
P20040 Gm16331-201ENSMUST00000144274 498 ntBASIC3.46□□□□□ -1.86
P20040 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.46□□□□□ -1.86
P20040 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.46□□□□□ -1.86
P20040 Gm23228-201ENSMUST00000157296 270 ntBASIC3.46□□□□□ -1.86
P20040 Gm22816-201ENSMUST00000157450 117 ntBASIC3.46□□□□□ -1.86
P20040 Gm24503-201ENSMUST00000158454 135 ntBASIC3.46□□□□□ -1.86
P20040 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.46□□□□□ -1.86
P20040 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
P20040 Gm24417-201ENSMUST00000178123 79 ntBASIC3.46□□□□□ -1.86
P20040 Gm24653-201ENSMUST00000178541 79 ntBASIC3.46□□□□□ -1.86
P20040 Gm25934-201ENSMUST00000178642 79 ntBASIC3.46□□□□□ -1.86
P20040 Gm21816-201ENSMUST00000179255 360 ntBASIC3.46□□□□□ -1.86
P20040 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
P20040 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.46□□□□□ -1.86
P20040 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.46□□□□□ -1.86
P20040 Gm3933-201ENSMUST00000195391 439 ntBASIC3.46□□□□□ -1.86
P20040 Gm43649-201ENSMUST00000196596 391 ntBASIC3.46□□□□□ -1.86
P20040 Gm8820-201ENSMUST00000204077 571 ntBASIC3.46□□□□□ -1.86
P20040 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.46□□□□□ -1.86
P20040 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.46□□□□□ -1.86
P20040 Gm18855-201ENSMUST00000206689 570 ntBASIC3.46□□□□□ -1.86
P20040 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.46□□□□□ -1.86
P20040 Gm18377-201ENSMUST00000215141 607 ntBASIC3.46□□□□□ -1.86
P20040 Gm5176-202ENSMUST00000220267 583 ntBASIC3.46□□□□□ -1.86
P20040 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.46□□□□□ -1.86
P20040 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.46□□□□□ -1.86
P20040 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.46□□□□□ -1.86
P20040 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.46□□□□□ -1.86
P20040 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.46□□□□□ -1.86
P20040 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.46□□□□□ -1.86
P20040 Gm25007-201ENSMUST00000083808 133 ntBASIC3.46□□□□□ -1.86
P20040 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
P20040 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
P20040 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
P20040 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
P20040 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
P20040 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.46□□□□□ -1.86
P20040 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.46□□□□□ -1.86
P20040 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
P20040 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
P20040 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
P20040 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
P20040 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.45□□□□□ -1.86
P20040 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
P20040 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
P20040 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.45□□□□□ -1.86
P20040 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
P20040 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
P20040 Gm12294-201ENSMUST00000119723 490 ntBASIC3.45□□□□□ -1.86
P20040 Gm16471-201ENSMUST00000121940 618 ntBASIC3.45□□□□□ -1.86
P20040 Gm14905-201ENSMUST00000122351 639 ntBASIC3.45□□□□□ -1.86
P20040 Gm25047-201ENSMUST00000122667 104 ntBASIC3.45□□□□□ -1.86
P20040 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
P20040 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
P20040 Gm25427-201ENSMUST00000157605 103 ntBASIC3.45□□□□□ -1.86
P20040 Gm24850-201ENSMUST00000158029 119 ntBASIC3.45□□□□□ -1.86
P20040 Gm9613-201ENSMUST00000171662 196 ntBASIC3.45□□□□□ -1.86
P20040 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.45□□□□□ -1.86
P20040 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms