Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm22646-201ENSMUST00000175130 115 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm18594-201ENSMUST00000175733 1403 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm21045-201ENSMUST00000183058 1020 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC2.89□□□□□ -1.95
Hmgb3O54879 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm38270-201ENSMUST00000192721 407 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Hmgb3O54879 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Rnu3a-202ENSMUST00000196710 213 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm6064-201ENSMUST00000203999 454 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm18462-201ENSMUST00000208112 417 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm18487-201ENSMUST00000215826 878 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm46327-201ENSMUST00000218240 365 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 CT009754.4-201ENSMUST00000221430 565 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC2.89□□□□□ -1.95
Hmgb3O54879 AC132112.1-201ENSMUST00000226354 505 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Rnu3a-201ENSMUST00000083936 214 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm22864-201ENSMUST00000083950 130 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm7676-201ENSMUST00000084055 319 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Gm43923-201ENSMUST00000203992 2911 ntBASIC2.89□□□□□ -1.95
Hmgb3O54879 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Hmgb3O54879 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb3O54879 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm23532-201ENSMUST00000104569 112 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm14753-201ENSMUST00000118503 246 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm12090-201ENSMUST00000118692 758 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm13007-201ENSMUST00000121866 365 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm26045-201ENSMUST00000157862 97 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm23897-201ENSMUST00000158110 158 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm22889-201ENSMUST00000158639 58 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb3O54879 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm19807-201ENSMUST00000173971 667 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.88□□□□□ -1.95
Hmgb3O54879 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb3O54879 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm37836-201ENSMUST00000195875 175 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm42502-201ENSMUST00000198550 1089 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb3O54879 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm44016-201ENSMUST00000203463 164 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm45228-201ENSMUST00000206585 352 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb3O54879 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm19599-201ENSMUST00000218898 358 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm17829-201ENSMUST00000219782 344 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb3O54879 n-R5s54-201ENSMUST00000083837 112 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm37936-201ENSMUST00000194647 1322 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.88□□□□□ -1.95
Hmgb3O54879 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb3O54879 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Hmgb3O54879 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hmgb3O54879 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm25765-201ENSMUST00000104100 132 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm24890-201ENSMUST00000104389 102 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm14628-201ENSMUST00000117508 635 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm12328-201ENSMUST00000118611 197 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm15387-201ENSMUST00000120421 648 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm13511-201ENSMUST00000121167 363 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm11982-201ENSMUST00000121480 314 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm15263-201ENSMUST00000121556 642 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm12685-201ENSMUST00000121702 214 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm15075-201ENSMUST00000122187 477 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm24382-201ENSMUST00000122698 107 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC2.87□□□□□ -1.95
Hmgb3O54879 Gm24244-201ENSMUST00000157317 130 ntBASIC2.87□□□□□ -1.95
Hmgb3O54879 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms