Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC4.23□□□□□ -1.73
Clk3O35492 Gm23032-201ENSMUST00000157995 107 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm16558-201ENSMUST00000163015 532 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.23□□□□□ -1.73
Clk3O35492 Mir6393-201ENSMUST00000183709 94 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Mir7056-201ENSMUST00000183776 59 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Mir6401-201ENSMUST00000184499 109 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm6501-201ENSMUST00000187178 916 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm28356-202ENSMUST00000187566 858 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Clk3O35492 Gm37095-201ENSMUST00000195421 205 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.23□□□□□ -1.73
Clk3O35492 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.23□□□□□ -1.73
Clk3O35492 Gm43580-201ENSMUST00000202892 284 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm19096-201ENSMUST00000209705 766 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Clk3O35492 AC120394.1-201ENSMUST00000217153 351 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Clk3O35492 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC4.23□□□□□ -1.73
Clk3O35492 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.23□□□□□ -1.73
Clk3O35492 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.23□□□□□ -1.73
Clk3O35492 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm18388-201ENSMUST00000222339 557 ntBASIC4.23□□□□□ -1.73
Clk3O35492 AC154552.5-201ENSMUST00000222352 207 ntBASIC4.23□□□□□ -1.73
Clk3O35492 AC117814.1-201ENSMUST00000226135 352 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Clk3O35492 Gm24031-201ENSMUST00000083930 131 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clk3O35492 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Clk3O35492 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Clk3O35492 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Clk3O35492 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Clk3O35492 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.23□□□□□ -1.73
Clk3O35492 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clk3O35492 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Clk3O35492 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.23□□□□□ -1.73
Clk3O35492 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clk3O35492 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.22□□□□□ -1.73
Clk3O35492 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.22□□□□□ -1.73
Clk3O35492 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.22□□□□□ -1.73
Clk3O35492 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Clk3O35492 Gm23594-201ENSMUST00000104307 134 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Gm15426-201ENSMUST00000117823 556 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm14607-201ENSMUST00000119119 491 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm11909-201ENSMUST00000121424 759 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.22□□□□□ -1.73
Clk3O35492 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Clk3O35492 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Clk3O35492 Gm6900-201ENSMUST00000178971 342 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Clk3O35492 Gm8604-201ENSMUST00000183150 965 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.22□□□□□ -1.73
Clk3O35492 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm45651-201ENSMUST00000210857 335 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.22□□□□□ -1.73
Clk3O35492 AC144733.1-201ENSMUST00000222893 1289 ntBASIC4.22□□□□□ -1.73
Clk3O35492 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Gm26449-201ENSMUST00000082452 104 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm23460-201ENSMUST00000083258 109 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Mir202-201ENSMUST00000083568 72 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Clk3O35492 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.22□□□□□ -1.73
Clk3O35492 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Clk3O35492 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.21□□□□□ -1.73
Clk3O35492 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Clk3O35492 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Clk3O35492 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clk3O35492 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clk3O35492 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.21□□□□□ -1.74
Clk3O35492 Gm22194-201ENSMUST00000116869 95 ntBASIC4.21□□□□□ -1.74
Clk3O35492 Gm14304-201ENSMUST00000117272 446 ntBASIC4.21□□□□□ -1.74
Clk3O35492 Gm14878-201ENSMUST00000118167 293 ntBASIC4.21□□□□□ -1.74
Clk3O35492 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.21□□□□□ -1.74
Clk3O35492 Gm12691-201ENSMUST00000120186 456 ntBASIC4.21□□□□□ -1.74
Clk3O35492 Gm22960-201ENSMUST00000122517 104 ntBASIC4.21□□□□□ -1.74
Clk3O35492 Gm24517-201ENSMUST00000122560 107 ntBASIC4.21□□□□□ -1.74
Clk3O35492 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clk3O35492 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.21□□□□□ -1.74
Clk3O35492 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.21□□□□□ -1.74
Clk3O35492 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms