Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm20672-201ENSMUST00000176605 261 ntBASIC3.62□□□□□ -1.83
Col4a6B1AVK5 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Mir7009-201ENSMUST00000184519 64 ntBASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Gm8747-201ENSMUST00000195392 751 ntBASIC3.62□□□□□ -1.83
Col4a6B1AVK5 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col4a6B1AVK5 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.62□□□□□ -1.83
Col4a6B1AVK5 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Gm23615-201ENSMUST00000082602 65 ntBASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Gm22043-201ENSMUST00000082993 158 ntBASIC3.62□□□□□ -1.83
Col4a6B1AVK5 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm24019-201ENSMUST00000178620 107 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm26243-201ENSMUST00000179260 107 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm9845-201ENSMUST00000056409 598 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm23296-201ENSMUST00000082555 107 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm24859-201ENSMUST00000082729 107 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col4a6B1AVK5 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm12578-201ENSMUST00000121244 417 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm23668-201ENSMUST00000157465 111 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm24681-201ENSMUST00000158760 107 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm23402-201ENSMUST00000178130 107 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm28030-201ENSMUST00000184987 138 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm29062-201ENSMUST00000186032 694 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm28255-201ENSMUST00000187101 694 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm29545-201ENSMUST00000188878 694 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm17917-201ENSMUST00000218561 953 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Vaultrc5-201ENSMUST00000083211 143 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col4a6B1AVK5 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Gm29218-205ENSMUST00000190846 615 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col4a6B1AVK5 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col4a6B1AVK5 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm15377-201ENSMUST00000119594 246 ntBASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm16420-201ENSMUST00000120258 856 ntBASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm14649-201ENSMUST00000121814 324 ntBASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm14389-201ENSMUST00000140453 241 ntBASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm32340-201ENSMUST00000192883 259 ntBASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm38088-201ENSMUST00000195829 241 ntBASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.59□□□□□ -1.84
Col4a6B1AVK5 Gm6841-201ENSMUST00000220602 598 ntBASIC3.59□□□□□ -1.84
Col4a6B1AVK5 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms