Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gm29524-201ENSMUST00000190819 699 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm43424-201ENSMUST00000200484 253 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm44088-201ENSMUST00000204595 237 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm44765-201ENSMUST00000206927 601 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Snord22-201ENSMUST00000083153 126 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Mir383-201ENSMUST00000083523 70 ntBASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Pcdhgb8A0A140LI48 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm12087-201ENSMUST00000121878 258 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm22211-201ENSMUST00000158097 156 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm24875-201ENSMUST00000158888 104 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm17204-201ENSMUST00000167936 478 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Mir3104-201ENSMUST00000174911 63 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm22108-201ENSMUST00000177961 106 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm20773-201ENSMUST00000178940 681 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm24798-201ENSMUST00000179334 106 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm25942-201ENSMUST00000180080 110 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Mir6414-201ENSMUST00000183685 82 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm38270-201ENSMUST00000192721 407 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm44300-201ENSMUST00000196792 121 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm44002-201ENSMUST00000205134 594 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm45072-201ENSMUST00000208673 929 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm18602-201ENSMUST00000209794 851 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm23273-201ENSMUST00000104058 135 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm12982-201ENSMUST00000117408 190 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm8666-201ENSMUST00000117517 292 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm11698-201ENSMUST00000117948 455 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm14795-201ENSMUST00000118461 471 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm13131-201ENSMUST00000122228 321 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm22478-201ENSMUST00000122570 154 ntBASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Pcdhgb8A0A140LI48 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms