Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm24430-201ENSMUST00000104077 104 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm14995-201ENSMUST00000117135 391 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm13755-201ENSMUST00000118509 305 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm24910-201ENSMUST00000157289 272 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm26169-201ENSMUST00000158420 135 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm9593-201ENSMUST00000166034 469 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm25874-201ENSMUST00000178030 79 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm6137-201ENSMUST00000187552 578 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm28802-201ENSMUST00000188624 944 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm44754-201ENSMUST00000208155 400 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm45660-201ENSMUST00000210267 151 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm45498-201ENSMUST00000210346 283 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm9269-201ENSMUST00000221661 578 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm6474-201ENSMUST00000223250 699 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 AC160999.1-201ENSMUST00000225675 810 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm26064-201ENSMUST00000083381 109 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm24928-201ENSMUST00000083399 107 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm25897-201ENSMUST00000083709 107 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
H2afb3S4R1G7 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm15266-201ENSMUST00000119635 255 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm13867-201ENSMUST00000120844 395 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm28596-201ENSMUST00000185870 696 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm28769-201ENSMUST00000190176 615 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm19694-201ENSMUST00000192364 505 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm18296-201ENSMUST00000192475 783 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm32295-201ENSMUST00000192558 696 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm31260-201ENSMUST00000193478 696 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm42805-201ENSMUST00000196158 276 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm43825-201ENSMUST00000199650 734 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm43580-201ENSMUST00000202892 284 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm45063-201ENSMUST00000203726 472 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm43892-201ENSMUST00000204373 265 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm44634-201ENSMUST00000206119 152 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm18113-201ENSMUST00000220630 303 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm26108-201ENSMUST00000083973 191 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm6177-201ENSMUST00000085589 465 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
H2afb3S4R1G7 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.25□□□□□ -1.73
H2afb3S4R1G7 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms