Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm23424-201ENSMUST00000103889 110 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm23271-201ENSMUST00000104052 124 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm5757-201ENSMUST00000117494 528 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm15926-201ENSMUST00000120492 550 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm14875-201ENSMUST00000120881 319 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm23957-201ENSMUST00000157209 90 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm28596-201ENSMUST00000185870 696 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm8600-201ENSMUST00000186320 905 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm32295-201ENSMUST00000192558 696 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm31260-201ENSMUST00000193478 696 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm38234-201ENSMUST00000195204 421 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.6□□□□□ -1.83
Cldn9Q9Z0S7 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm25765-201ENSMUST00000104100 132 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm13650-201ENSMUST00000117729 433 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm7219-201ENSMUST00000119619 297 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm6373-201ENSMUST00000121026 360 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm12001-201ENSMUST00000121727 913 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm22890-201ENSMUST00000158642 144 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm27025-201ENSMUST00000182392 942 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm28471-201ENSMUST00000185994 615 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm19774-201ENSMUST00000190667 114 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm4859-201ENSMUST00000199625 787 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm45034-201ENSMUST00000206831 482 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm45189-201ENSMUST00000208567 363 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm5185-201ENSMUST00000080271 619 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm23455-201ENSMUST00000083331 100 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm26064-201ENSMUST00000083381 109 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Olfr713-201ENSMUST00000098139 975 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.59□□□□□ -1.83
Cldn9Q9Z0S7 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.59□□□□□ -1.84
Cldn9Q9Z0S7 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
Cldn9Q9Z0S7 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Cldn9Q9Z0S7 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm15933-201ENSMUST00000117215 616 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm11393-201ENSMUST00000118019 288 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm9078-201ENSMUST00000119126 617 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm13155-201ENSMUST00000119277 646 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm5384-201ENSMUST00000120313 463 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm8178-201ENSMUST00000121570 646 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm23365-201ENSMUST00000175019 125 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm25960-201ENSMUST00000175110 125 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm44453-201ENSMUST00000175161 126 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm25195-201ENSMUST00000177656 126 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm29534-201ENSMUST00000187328 382 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm43651-201ENSMUST00000199796 439 ntBASIC3.58□□□□□ -1.84
Cldn9Q9Z0S7 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms