Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.81
Trim3Q9R1R2 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm24544-201ENSMUST00000103862 110 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm12252-201ENSMUST00000119517 219 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm13419-201ENSMUST00000121711 271 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm16359-201ENSMUST00000124511 289 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm16327-201ENSMUST00000137146 228 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm22277-201ENSMUST00000157204 277 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm25386-201ENSMUST00000157814 288 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm25713-201ENSMUST00000158625 109 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Mir6926-201ENSMUST00000184562 68 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm27190-201ENSMUST00000184890 542 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Mir6715-201ENSMUST00000184990 57 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm8790-201ENSMUST00000194108 322 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm17967-201ENSMUST00000195319 647 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm44650-201ENSMUST00000206929 194 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim3Q9R1R2 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.77□□□□□ -1.81
Trim3Q9R1R2 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Mir551b-201ENSMUST00000102165 98 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm12486-201ENSMUST00000120887 541 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm15274-201ENSMUST00000131442 291 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm21979-201ENSMUST00000139887 291 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm15259-201ENSMUST00000151262 291 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm26045-201ENSMUST00000157862 97 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm5974-201ENSMUST00000181607 986 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Mir6996-201ENSMUST00000183922 61 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm42850-201ENSMUST00000202094 201 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm45727-201ENSMUST00000212886 572 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm7530-201ENSMUST00000218466 605 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm19786-201ENSMUST00000222589 580 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.76□□□□□ -1.81
Trim3Q9R1R2 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim3Q9R1R2 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms