Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm13131-201ENSMUST00000122228 321 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm26046-201ENSMUST00000157312 166 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm24061-201ENSMUST00000157489 120 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm37050-201ENSMUST00000193464 466 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm44456-201ENSMUST00000196554 89 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm18325-201ENSMUST00000203228 835 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm5338-201ENSMUST00000209530 639 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm19232-201ENSMUST00000211621 652 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm4052-201ENSMUST00000220890 451 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Gm7093-201ENSMUST00000223004 581 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 AC166574.7-201ENSMUST00000228502 704 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Mir31-201ENSMUST00000083474 106 ntBASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trem1Q9JKE2 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 AC120153.1-201ENSMUST00000226502 1311 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm4736-201ENSMUST00000100870 380 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm13890-201ENSMUST00000117578 390 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm14933-201ENSMUST00000118840 481 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm12495-201ENSMUST00000119750 447 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm15488-201ENSMUST00000121682 670 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm14126-201ENSMUST00000122345 395 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm23167-201ENSMUST00000157155 103 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm23327-201ENSMUST00000157420 78 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm24002-201ENSMUST00000158456 104 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm5929-201ENSMUST00000166883 487 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm27896-201ENSMUST00000175162 317 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm26318-201ENSMUST00000176507 96 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm28997-201ENSMUST00000188759 429 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm29036-201ENSMUST00000189967 877 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm37828-201ENSMUST00000192496 432 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm36986-201ENSMUST00000195320 353 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm44849-201ENSMUST00000207595 484 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm18877-201ENSMUST00000207706 539 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm18127-201ENSMUST00000208479 725 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm7034-201ENSMUST00000218638 645 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm18409-202ENSMUST00000220105 529 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 CT009600.1-201ENSMUST00000228771 337 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Mir188-201ENSMUST00000083464 68 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.56□□□□□ -1.84
Trem1Q9JKE2 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Mir680-1-201ENSMUST00000102257 109 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm15854-201ENSMUST00000118879 808 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm11398-201ENSMUST00000120330 320 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm22478-201ENSMUST00000122570 154 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm4207-201ENSMUST00000173144 960 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm27690-201ENSMUST00000184596 126 ntBASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC3.55□□□□□ -1.84
Trem1Q9JKE2 Gm6501-201ENSMUST00000187178 916 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms