Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm24061-201ENSMUST00000157489 120 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Gm17194-201ENSMUST00000164610 348 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Mir7008-201ENSMUST00000184398 63 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Gm6057-201ENSMUST00000195927 314 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Gm17775-201ENSMUST00000198542 258 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Gm43975-201ENSMUST00000203023 481 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.63□□□□□ -1.99
Smco4Q9JIS3 AC159263.3-201ENSMUST00000223434 460 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 CT025689.2-201ENSMUST00000224979 429 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 AC123658.1-201ENSMUST00000228364 867 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Mir342-201ENSMUST00000083502 99 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Snord15a-201ENSMUST00000083888 148 ntBASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.63□□□□□ -1.99
Smco4Q9JIS3 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm12782-201ENSMUST00000117519 727 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm11456-201ENSMUST00000121070 256 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm23501-201ENSMUST00000157744 256 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm23505-201ENSMUST00000158989 130 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm22858-201ENSMUST00000174972 76 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm30341-201ENSMUST00000194363 289 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Mir26a-2-201ENSMUST00000083496 84 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Smco4Q9JIS3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm24117-201ENSMUST00000103973 133 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Mir466j-201ENSMUST00000116876 122 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm14610-201ENSMUST00000118358 966 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm11869-201ENSMUST00000118701 329 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm12757-201ENSMUST00000119465 800 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm23465-201ENSMUST00000157134 262 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm26310-201ENSMUST00000157766 117 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm23782-201ENSMUST00000157939 120 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm16571-201ENSMUST00000159112 291 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm7582-201ENSMUST00000160831 603 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm20674-201ENSMUST00000177452 369 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm28534-201ENSMUST00000187744 676 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm42832-201ENSMUST00000196361 745 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm43440-201ENSMUST00000201957 729 ntBASIC2.61□□□□□ -1.99
Smco4Q9JIS3 Gm44513-201ENSMUST00000206811 439 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms