Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm23228-201ENSMUST00000157296 270 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm22890-201ENSMUST00000158642 144 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm24550-201ENSMUST00000158648 279 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm22646-201ENSMUST00000175130 115 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm22120-201ENSMUST00000175590 70 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm37934-201ENSMUST00000192902 402 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm7449-201ENSMUST00000194393 663 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm38334-201ENSMUST00000195060 313 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm45523-201ENSMUST00000210712 799 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Lima1Q9ERG0 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.59□□□□□ -1.84
Lima1Q9ERG0 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.59□□□□□ -1.84
Lima1Q9ERG0 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
Lima1Q9ERG0 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm24544-201ENSMUST00000103862 110 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm12900-201ENSMUST00000120919 573 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm13460-201ENSMUST00000121274 353 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm5963-201ENSMUST00000143451 236 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm2892-201ENSMUST00000145537 711 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm25436-201ENSMUST00000158275 145 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm22889-201ENSMUST00000158639 58 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm9890-201ENSMUST00000171867 537 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm4207-201ENSMUST00000173144 960 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Mir5112-201ENSMUST00000174897 60 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Lima1Q9ERG0 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm13009-201ENSMUST00000121307 267 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Gm23407-201ENSMUST00000082538 91 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Snora70-201ENSMUST00000083047 137 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Lima1Q9ERG0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.56□□□□□ -1.84
Lima1Q9ERG0 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms