Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Mir690-201ENSMUST00000102110 109 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm14890-201ENSMUST00000117660 676 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm23957-201ENSMUST00000157209 90 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm22600-201ENSMUST00000157598 269 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm23198-201ENSMUST00000158811 91 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm37193-201ENSMUST00000193087 513 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm43308-201ENSMUST00000197236 373 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm17829-201ENSMUST00000219782 344 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdc40Q9DC48 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.6□□□□□ -1.83
Cdc40Q9DC48 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm23942-201ENSMUST00000101956 107 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm24935-201ENSMUST00000103770 110 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm12982-201ENSMUST00000117408 190 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm11905-201ENSMUST00000117653 678 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm13788-201ENSMUST00000120767 601 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm25971-201ENSMUST00000158953 286 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Mir5098-201ENSMUST00000175320 82 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm27773-201ENSMUST00000184087 78 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm29598-201ENSMUST00000188996 588 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm42850-201ENSMUST00000202094 201 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm18944-201ENSMUST00000207672 643 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdc40Q9DC48 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
Cdc40Q9DC48 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Cdc40Q9DC48 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Cdc40Q9DC48 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.59□□□□□ -1.84
Cdc40Q9DC48 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm15951-201ENSMUST00000118377 400 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm13865-201ENSMUST00000120957 865 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm25332-201ENSMUST00000158038 105 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm8745-201ENSMUST00000207846 782 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm7786-201ENSMUST00000210494 436 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm25200-201ENSMUST00000083094 130 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Gm26064-201ENSMUST00000083381 109 ntBASIC3.58□□□□□ -1.84
Cdc40Q9DC48 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms