Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm8641-201ENSMUST00000186995 826 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28654-201ENSMUST00000189801 379 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28803-201ENSMUST00000190385 764 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm5185-201ENSMUST00000080271 619 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc3Q9D6Y1 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22115-201ENSMUST00000103976 133 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm23923-201ENSMUST00000104108 133 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22497-201ENSMUST00000104499 131 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13607-201ENSMUST00000117875 539 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13076-201ENSMUST00000118041 204 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11704-201ENSMUST00000120031 214 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13865-201ENSMUST00000120957 865 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm14229-201ENSMUST00000121178 850 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm11350-201ENSMUST00000121436 870 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm12276-201ENSMUST00000121709 301 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22380-201ENSMUST00000157479 95 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm24008-201ENSMUST00000157733 138 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm24550-201ENSMUST00000158648 279 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm27044-201ENSMUST00000183033 796 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28639-201ENSMUST00000191519 481 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm18403-201ENSMUST00000192907 529 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm17966-201ENSMUST00000193453 594 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm36943-201ENSMUST00000194422 282 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm44355-201ENSMUST00000200417 104 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm14050-201ENSMUST00000117052 346 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm15180-201ENSMUST00000117745 492 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Mir1934-201ENSMUST00000158127 83 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm24976-201ENSMUST00000158972 135 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm28596-201ENSMUST00000185870 696 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm32295-201ENSMUST00000192558 696 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm31260-201ENSMUST00000193478 696 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm19726-201ENSMUST00000205008 240 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm20946-201ENSMUST00000212367 461 ntBASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc3Q9D6Y1 Gm22739-201ENSMUST00000083437 160 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms