Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm19427-201ENSMUST00000183619 208 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm4734-201ENSMUST00000200117 777 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm44059-201ENSMUST00000204048 351 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm44050-201ENSMUST00000204263 527 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm44852-201ENSMUST00000207950 369 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm18462-201ENSMUST00000208112 417 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm46146-201ENSMUST00000217483 346 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 AC111046.1-201ENSMUST00000217715 412 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm18388-201ENSMUST00000222339 557 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm24035-201ENSMUST00000082867 107 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Gm24921-201ENSMUST00000083024 107 ntBASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Stag1Q9D3E6 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm12261-201ENSMUST00000117499 645 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm13557-201ENSMUST00000120771 382 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm23032-201ENSMUST00000157995 107 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm22211-201ENSMUST00000158097 156 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm24939-201ENSMUST00000158325 137 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm44054-201ENSMUST00000203814 372 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 AC167192.4-201ENSMUST00000224087 993 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Stag1Q9D3E6 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm15108-201ENSMUST00000116160 803 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm15148-201ENSMUST00000117602 156 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm15058-201ENSMUST00000117689 458 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm11878-201ENSMUST00000117908 400 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm12102-201ENSMUST00000118251 604 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm12994-201ENSMUST00000119601 447 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm13170-201ENSMUST00000119716 643 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm14784-201ENSMUST00000121604 663 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm25264-201ENSMUST00000158519 117 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm21070-201ENSMUST00000182425 985 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm27861-201ENSMUST00000183920 214 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Mir3620-201ENSMUST00000184710 61 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm36974-201ENSMUST00000194200 1071 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm44348-201ENSMUST00000200165 122 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm44449-201ENSMUST00000203610 153 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm8035-201ENSMUST00000204625 687 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 Gm6112-201ENSMUST00000208037 629 ntBASIC5.43□□□□□ -1.54
Stag1Q9D3E6 AC156795.1-201ENSMUST00000214655 414 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms