Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm28190-201ENSMUST00000189766 722 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm38280-201ENSMUST00000192610 158 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm37501-201ENSMUST00000192830 691 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Mir1892-201ENSMUST00000197752 80 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Mir5121-201ENSMUST00000198528 74 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm43028-201ENSMUST00000202561 481 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm44058-201ENSMUST00000204335 467 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm23460-201ENSMUST00000083258 109 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm21286-201ENSMUST00000098035 545 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Vps28Q9D1C8 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm15076-201ENSMUST00000117076 474 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm12884-201ENSMUST00000120371 325 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm5123-201ENSMUST00000121905 837 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm5755-201ENSMUST00000152394 837 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm24224-201ENSMUST00000158828 258 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm16558-201ENSMUST00000163015 532 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm27254-201ENSMUST00000183926 517 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm28917-201ENSMUST00000187294 237 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm28466-201ENSMUST00000190678 659 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm28766-201ENSMUST00000191086 234 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Mir383-201ENSMUST00000083523 70 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Neat1-201ENSMUST00000173672 20771 ntBASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Vps28Q9D1C8 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Synpr-207ENSMUST00000223583 3362 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms