Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm10292-201ENSMUST00000183142 581 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Mir7658-201ENSMUST00000184043 57 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm27733-201ENSMUST00000184803 68 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm18547-201ENSMUST00000192439 811 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm8820-201ENSMUST00000204077 571 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm45072-201ENSMUST00000208673 929 ntBASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Smc1aQ9CU62 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Smc1aQ9CU62 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.46□□□□□ -1.69
Smc1aQ9CU62 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm13868-201ENSMUST00000122411 294 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm24998-201ENSMUST00000157908 89 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Mir6996-201ENSMUST00000183922 61 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm29492-201ENSMUST00000187124 457 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm28267-201ENSMUST00000191093 265 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm4248-201ENSMUST00000196905 316 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm43855-201ENSMUST00000197462 507 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm44092-201ENSMUST00000204470 258 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm7204-201ENSMUST00000062591 600 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm25800-201ENSMUST00000082636 134 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Mir323-201ENSMUST00000083683 86 ntBASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Smc1aQ9CU62 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm11406-201ENSMUST00000117418 484 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Clec2f-201ENSMUST00000121051 374 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm23957-201ENSMUST00000157209 90 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm27718-201ENSMUST00000183721 86 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm29038-201ENSMUST00000191543 678 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Mir7682-201ENSMUST00000198467 58 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm43930-201ENSMUST00000203868 845 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm7639-201ENSMUST00000212608 484 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.45□□□□□ -1.7
Smc1aQ9CU62 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Smc1aQ9CU62 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms