Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm13804-201ENSMUST00000119552 172 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm22563-201ENSMUST00000157333 269 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm26489-201ENSMUST00000157880 264 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm22518-201ENSMUST00000158267 68 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm3030-201ENSMUST00000163410 516 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm21809-201ENSMUST00000178495 468 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm25671-201ENSMUST00000178612 105 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm23307-201ENSMUST00000179167 105 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm17412-201ENSMUST00000179261 468 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm25286-201ENSMUST00000179790 105 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm25942-201ENSMUST00000180080 110 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm2914-201ENSMUST00000186120 328 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm35648-201ENSMUST00000202304 475 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm44132-201ENSMUST00000205142 151 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm44779-201ENSMUST00000206937 708 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm17780-201ENSMUST00000207142 612 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm17990-201ENSMUST00000211728 553 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm18587-201ENSMUST00000213736 841 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 CT025606.1-201ENSMUST00000218273 324 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 AC119241.1-201ENSMUST00000223651 534 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 CT010506.2-201ENSMUST00000225618 183 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 AV026068-231ENSMUST00000225862 482 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 AC154598.1-201ENSMUST00000227079 347 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 AC122341.1-201ENSMUST00000227291 560 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm4017-201ENSMUST00000084813 338 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm43283-201ENSMUST00000199138 2548 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm14128-201ENSMUST00000119514 1011 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm13717-201ENSMUST00000119868 365 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm13077-201ENSMUST00000121941 484 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm24719-201ENSMUST00000157520 110 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm23354-201ENSMUST00000158426 104 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm24343-201ENSMUST00000158708 111 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm24175-201ENSMUST00000158931 129 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm27820-201ENSMUST00000183628 175 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm43315-201ENSMUST00000198120 313 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm35876-201ENSMUST00000205044 459 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm45026-201ENSMUST00000205292 833 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm31849-201ENSMUST00000220306 375 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm9309-201ENSMUST00000223537 546 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 AC161758.1-201ENSMUST00000226123 310 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 AC134420.1-201ENSMUST00000227027 289 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim11Q99PQ2 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.03□□□□□ -1.44
Trim11Q99PQ2 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim11Q99PQ2 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim11Q99PQ2 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim11Q99PQ2 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim11Q99PQ2 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim11Q99PQ2 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms