Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.77□□□□□ -1.65
Clrn1Q8K445 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Clrn1Q8K445 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Clrn1Q8K445 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.77□□□□□ -1.65
Clrn1Q8K445 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm25418-201ENSMUST00000104214 129 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm15399-201ENSMUST00000118055 724 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm11409-201ENSMUST00000118621 403 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm14591-201ENSMUST00000120407 518 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm15014-201ENSMUST00000120742 258 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm11804-201ENSMUST00000121663 468 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm16134-201ENSMUST00000161714 336 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm22631-201ENSMUST00000179656 94 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm27818-201ENSMUST00000184536 159 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm44776-201ENSMUST00000207212 381 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm19140-201ENSMUST00000209790 421 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm25187-201ENSMUST00000083906 133 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.76□□□□□ -1.65
Clrn1Q8K445 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.76□□□□□ -1.65
Clrn1Q8K445 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Clrn1Q8K445 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Snord70-201ENSMUST00000104157 87 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm25919-201ENSMUST00000104271 132 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm15772-201ENSMUST00000118533 438 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm13172-201ENSMUST00000118685 256 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm14046-201ENSMUST00000119389 509 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm13804-201ENSMUST00000119552 172 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm11904-201ENSMUST00000120562 248 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm13214-201ENSMUST00000122137 408 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm22563-201ENSMUST00000157333 269 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm26404-201ENSMUST00000158498 109 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm25365-201ENSMUST00000158852 121 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Mir3110-201ENSMUST00000175053 80 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm21171-201ENSMUST00000180048 673 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm27528-201ENSMUST00000183544 205 ntBASIC4.75□□□□□ -1.65
Clrn1Q8K445 Gm27161-201ENSMUST00000183960 562 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms