Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm15058-201ENSMUST00000117689 458 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm14677-201ENSMUST00000117866 486 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm11633-201ENSMUST00000118176 444 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm15312-201ENSMUST00000118827 271 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm14933-201ENSMUST00000118840 481 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm6587-201ENSMUST00000120219 613 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm13865-201ENSMUST00000120957 865 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm15309-201ENSMUST00000121644 240 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm25653-201ENSMUST00000158473 138 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm16134-201ENSMUST00000161714 336 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm3111-201ENSMUST00000167426 490 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Trbv10-201ENSMUST00000168322 289 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm27883-201ENSMUST00000183941 102 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm27564-201ENSMUST00000185196 96 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm46996-201ENSMUST00000220924 408 ntBASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Brf1Q8CFK2 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Brf1Q8CFK2 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Brf1Q8CFK2 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm25097-201ENSMUST00000104042 145 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Mir105-201ENSMUST00000104655 80 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm7834-201ENSMUST00000117560 437 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm13386-201ENSMUST00000117677 124 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm14771-201ENSMUST00000118249 203 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm6806-201ENSMUST00000120092 1006 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm16445-201ENSMUST00000120399 714 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm5646-201ENSMUST00000120568 714 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm15022-201ENSMUST00000122074 746 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm7855-201ENSMUST00000137737 687 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm23799-201ENSMUST00000175559 120 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm15143-201ENSMUST00000178180 714 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm24949-201ENSMUST00000183609 215 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm28489-201ENSMUST00000186655 316 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm37167-201ENSMUST00000194946 396 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm43142-201ENSMUST00000198670 361 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm43276-201ENSMUST00000199712 364 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm44002-201ENSMUST00000205134 594 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm9616-201ENSMUST00000221154 781 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Mecom-201ENSMUST00000061088 348 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Gm24490-201ENSMUST00000083803 98 ntBASIC5.33□□□□□ -1.56
Brf1Q8CFK2 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Brf1Q8CFK2 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm26384-201ENSMUST00000102183 110 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm26312-201ENSMUST00000157769 165 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm22536-201ENSMUST00000158171 134 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm26173-201ENSMUST00000158416 136 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC5.32□□□□□ -1.56
Brf1Q8CFK2 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms