Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm25150-201ENSMUST00000157121 60 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm22158-201ENSMUST00000158411 126 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm23152-201ENSMUST00000175322 116 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Mir5110-201ENSMUST00000175537 87 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm25019-201ENSMUST00000179732 110 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm27883-201ENSMUST00000183941 102 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm9238-201ENSMUST00000196181 329 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm18748-201ENSMUST00000198507 622 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm35702-201ENSMUST00000198653 511 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm17987-201ENSMUST00000206902 603 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm2607-201ENSMUST00000212389 627 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm46103-201ENSMUST00000217614 341 ntBASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc28bQ8CEG5 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm15125-201ENSMUST00000116185 800 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm14932-201ENSMUST00000117112 453 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm12808-201ENSMUST00000120597 404 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm14463-201ENSMUST00000121117 498 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm15885-201ENSMUST00000122114 388 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm24113-201ENSMUST00000157477 276 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm22536-201ENSMUST00000158171 134 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm22693-201ENSMUST00000175049 442 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm27535-201ENSMUST00000183814 157 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm27445-201ENSMUST00000184484 72 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm6064-201ENSMUST00000203999 454 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm19761-201ENSMUST00000205372 391 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm4052-201ENSMUST00000220890 451 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm24144-201ENSMUST00000082632 111 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Snora70-201ENSMUST00000083047 137 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Gm336-201ENSMUST00000186376 1480 ntBASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc28bQ8CEG5 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc28bQ8CEG5 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.96□□□□□ -1.77
Ccdc28bQ8CEG5 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc28bQ8CEG5 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc28bQ8CEG5 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
Ccdc28bQ8CEG5 Gm26377-201ENSMUST00000102184 108 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm23608-201ENSMUST00000104545 128 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm13731-201ENSMUST00000117332 196 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm15752-201ENSMUST00000117427 394 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm13745-201ENSMUST00000121994 527 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm2892-201ENSMUST00000145537 711 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Mir7674-201ENSMUST00000184964 63 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm18800-202ENSMUST00000188688 1105 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm28191-201ENSMUST00000189112 211 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm18340-201ENSMUST00000196342 609 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm43524-201ENSMUST00000197278 298 ntBASIC3.96□□□□□ -1.78
Ccdc28bQ8CEG5 Gm4859-201ENSMUST00000199625 787 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms