Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.94□□□□□ -1.46
Pcdhb7Q8CDY9 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb7Q8CDY9 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdhb7Q8CDY9 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb7Q8CDY9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdhb7Q8CDY9 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdhb7Q8CDY9 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm15195-201ENSMUST00000118775 263 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm6062-201ENSMUST00000120462 631 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm13007-201ENSMUST00000121866 365 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm15237-201ENSMUST00000122104 469 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm26278-201ENSMUST00000157098 132 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm16102-201ENSMUST00000160955 420 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm6105-201ENSMUST00000200580 624 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm44016-201ENSMUST00000203463 164 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm45005-201ENSMUST00000206640 157 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdhb7Q8CDY9 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Mir466h-201ENSMUST00000104748 81 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm15844-201ENSMUST00000118016 576 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm13998-201ENSMUST00000120952 335 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Snora47-201ENSMUST00000157483 138 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm24584-201ENSMUST00000157972 107 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm23224-201ENSMUST00000158122 271 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm3170-201ENSMUST00000168753 850 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm17183-201ENSMUST00000171170 493 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm3348-201ENSMUST00000177813 850 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm23725-201ENSMUST00000177876 107 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm22286-201ENSMUST00000179708 107 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm9022-202ENSMUST00000183285 483 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm29031-201ENSMUST00000185316 614 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm29000-201ENSMUST00000185444 614 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm28204-201ENSMUST00000185934 614 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm28290-201ENSMUST00000186505 614 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm28161-201ENSMUST00000186669 614 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm28749-209ENSMUST00000189599 614 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm37881-201ENSMUST00000193001 421 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm33163-201ENSMUST00000194504 614 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm37358-201ENSMUST00000195492 479 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm43407-201ENSMUST00000199816 317 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm44108-201ENSMUST00000203525 422 ntBASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.92□□□□□ -1.46
Pcdhb7Q8CDY9 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms