Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Gm46996-201ENSMUST00000220924 408 ntBASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Gm18388-201ENSMUST00000222339 557 ntBASIC3.59□□□□□ -1.83
Trub1Q8C0D0 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.59□□□□□ -1.83
Trub1Q8C0D0 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.59□□□□□ -1.83
Trub1Q8C0D0 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trub1Q8C0D0 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.59□□□□□ -1.84
Trub1Q8C0D0 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Mir147-201ENSMUST00000102354 79 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm11673-201ENSMUST00000117846 331 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm13122-201ENSMUST00000118380 453 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm5123-201ENSMUST00000121905 837 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm12858-201ENSMUST00000121913 208 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm5755-201ENSMUST00000152394 837 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm23824-201ENSMUST00000158741 276 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Mir5127-201ENSMUST00000175295 71 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Mir7028-201ENSMUST00000185016 64 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm37293-201ENSMUST00000191658 295 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm19243-201ENSMUST00000198592 269 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm44003-201ENSMUST00000203024 490 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm44016-201ENSMUST00000203463 164 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm44845-201ENSMUST00000208773 335 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm17101-201ENSMUST00000169520 1588 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.58□□□□□ -1.84
Trub1Q8C0D0 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm13314-201ENSMUST00000118742 335 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm12691-201ENSMUST00000120186 456 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm13692-201ENSMUST00000120774 371 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Mir5710-201ENSMUST00000176884 69 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm8703-201ENSMUST00000203793 730 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm35405-201ENSMUST00000218754 400 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm18120-201ENSMUST00000220079 511 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.57□□□□□ -1.84
Trub1Q8C0D0 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm25833-201ENSMUST00000104137 133 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm9157-201ENSMUST00000117673 225 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm15014-201ENSMUST00000120742 258 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm15038-201ENSMUST00000122144 296 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm13092-201ENSMUST00000136346 260 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm6969-201ENSMUST00000140065 342 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm23179-201ENSMUST00000158693 304 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm3030-201ENSMUST00000163410 516 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm3339-201ENSMUST00000163462 475 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm21816-201ENSMUST00000179255 360 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm43601-201ENSMUST00000196294 945 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Gm19219-201ENSMUST00000215863 724 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.56□□□□□ -1.84
Trub1Q8C0D0 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trub1Q8C0D0 Snord35b-201ENSMUST00000082833 87 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms