Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm25264-201ENSMUST00000158519 117 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Mir1264-201ENSMUST00000175381 86 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm21070-201ENSMUST00000182425 985 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Mir3620-201ENSMUST00000184710 61 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm37659-201ENSMUST00000194574 111 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm38334-201ENSMUST00000195060 313 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm17893-201ENSMUST00000203017 770 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm46190-201ENSMUST00000219650 427 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm9616-201ENSMUST00000221154 781 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 AC163646.2-201ENSMUST00000227962 141 ntBASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Usp40Q8BWR4 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Mir669g-201ENSMUST00000116809 123 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm11372-201ENSMUST00000117348 570 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm11708-201ENSMUST00000119530 832 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm25667-201ENSMUST00000157701 275 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Mir6975-201ENSMUST00000184879 61 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm28579-201ENSMUST00000186143 369 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm43856-201ENSMUST00000197004 369 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm43655-201ENSMUST00000197367 222 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm8774-201ENSMUST00000203621 692 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.25□□□□□ -1.41
Usp40Q8BWR4 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp40Q8BWR4 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm12062-201ENSMUST00000117533 259 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm9308-201ENSMUST00000119073 448 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm14919-201ENSMUST00000120839 390 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm19089-201ENSMUST00000197207 613 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm43228-201ENSMUST00000200735 264 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 AC153526.4-201ENSMUST00000217713 379 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 AC131720.2-201ENSMUST00000220420 431 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 AC154305.1-201ENSMUST00000224443 450 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 AC154592.1-201ENSMUST00000225784 574 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 AC154328.1-201ENSMUST00000225875 307 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm25005-201ENSMUST00000083812 156 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp40Q8BWR4 Gm43185-201ENSMUST00000197507 2775 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm36931-201ENSMUST00000192997 4801 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm26367-201ENSMUST00000104165 132 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm25559-201ENSMUST00000157182 74 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm4134-201ENSMUST00000173244 563 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm18560-201ENSMUST00000173463 1123 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm18342-201ENSMUST00000186987 694 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm2427-201ENSMUST00000189121 881 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm37881-201ENSMUST00000193001 421 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms