Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm15974-201ENSMUST00000159103 531 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm16558-201ENSMUST00000163015 532 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm18505-201ENSMUST00000187360 790 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm37088-201ENSMUST00000193887 406 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm37431-201ENSMUST00000195102 111 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm43601-201ENSMUST00000196294 945 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm43214-201ENSMUST00000199242 352 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.23□□□□□ -1.73
Ccdc40Q8BI79 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Mir804-201ENSMUST00000103251 95 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm15076-201ENSMUST00000117076 474 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm12173-201ENSMUST00000117622 273 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm22208-201ENSMUST00000122658 110 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm18540-201ENSMUST00000204025 526 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm29774-201ENSMUST00000219270 436 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc40Q8BI79 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc40Q8BI79 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Snora64-201ENSMUST00000104521 134 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm24739-201ENSMUST00000158855 292 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm23152-201ENSMUST00000175322 116 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Mir6537-201ENSMUST00000184150 110 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm18100-201ENSMUST00000200897 452 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm6112-201ENSMUST00000208037 629 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm5176-202ENSMUST00000220267 583 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc40Q8BI79 BC051076-202ENSMUST00000199477 2868 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm11488-201ENSMUST00000117277 863 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm14795-201ENSMUST00000118461 471 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.2□□□□□ -1.74
Ccdc40Q8BI79 Gm9003-201ENSMUST00000121810 482 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms