Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm13831-201ENSMUST00000118764 302 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm9078-201ENSMUST00000119126 617 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm14282-201ENSMUST00000119484 240 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm14927-201ENSMUST00000120283 454 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm5384-201ENSMUST00000120313 463 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm11931-201ENSMUST00000121630 447 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm13852-201ENSMUST00000122350 242 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm22613-201ENSMUST00000122679 292 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm16490-201ENSMUST00000165299 351 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Mir6345-201ENSMUST00000184286 128 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm43559-201ENSMUST00000198755 466 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm4263-202ENSMUST00000221392 667 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm26064-201ENSMUST00000083381 109 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Mir30e-201ENSMUST00000083475 92 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm4736-201ENSMUST00000100870 380 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm22269-201ENSMUST00000104002 130 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm23271-201ENSMUST00000104052 124 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm13268-201ENSMUST00000117485 433 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm14299-201ENSMUST00000117586 397 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm15377-201ENSMUST00000119594 246 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm11645-201ENSMUST00000121589 649 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Mir5098-201ENSMUST00000175320 82 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm26556-201ENSMUST00000180645 320 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm20574-201ENSMUST00000182867 917 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Mir3620-201ENSMUST00000184710 61 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm27952-201ENSMUST00000184748 105 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm28191-201ENSMUST00000189112 211 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm29334-201ENSMUST00000190334 357 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm38201-201ENSMUST00000192143 387 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm7449-201ENSMUST00000194393 663 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm6240-201ENSMUST00000208014 473 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm30674-201ENSMUST00000214523 392 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm24950-201ENSMUST00000082768 191 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm23971-201ENSMUST00000083317 191 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm23849-201ENSMUST00000083833 191 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm26316-201ENSMUST00000083886 191 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clrn3Q8BHH8 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms